eF-site ID 1tp7-B
PDB Code 1tp7
Chain B

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Title Crystal Structure of the RNA-dependent RNA Polymerase from Human Rhinovirus 16
Classification TRANSFERASE
Compound Genome polyprotein
Source Human rhinovirus 16 (HRV-16) (POLG_HRV16)
Sequence B:  GQIQISKHVKDVGLPSIHTPTKTKLQPSVFYDIFPGSKEP
AVLTEKDPRLKVDFDSALFSKYKGNTECSLNEHIQVAVAH
YSAQLATLDIDPQPIAXEDSVFGXDGLEALDLNTSAGYPY
VTLGIKKKDLINNKTKDISKLKLALDKYDVDLPXITFLKD
ELRKKDKIAAGKTRVIEASSINDTILFRTVYGNLFSKFHL
NPGVVTGCAVGCDPETFWSKIPLXLDGDCIXAFDYTNYDG
SIHPIWFKALGXVLDNLSFNPTLINRLCNSKHIFKSTYYE
VEGGVPSGCSGTSIFNSXINNIIIRTLVLDAYKHIDLDKL
KIIAYGDDVIFSYKYKLDXEAIAKEGQKYGLTITPADKSS
EFKELDYGNVTFLKRGFRQDDKYKFLIHPTFPVEEIYESI
RWTKKPSQXQEHVLSLCHLXWHNGPEIYKDFETKIRSVSA
GRALYIPPYELLRHEWYEKF
Description (1)  Genome polyprotein (E.C.2.7.7.48)


Functional site

1) chain B
residue 212
type
sequence C
description BINDING SITE FOR RESIDUE SO4 B 471
source : AC2

2) chain B
residue 213
type
sequence D
description BINDING SITE FOR RESIDUE SO4 B 471
source : AC2

3) chain B
residue 216
type
sequence T
description BINDING SITE FOR RESIDUE SO4 B 471
source : AC2

4) chain B
residue 217
type
sequence F
description BINDING SITE FOR RESIDUE SO4 B 471
source : AC2

5) chain B
residue 220
type
sequence K
description BINDING SITE FOR RESIDUE SO4 B 471
source : AC2

6) chain B
residue 234
type BINDING
sequence D
description BINDING => ECO:0000250|UniProtKB:P03300
source Swiss-Prot : SWS_FT_FI1

7) chain B
residue 327
type BINDING
sequence D
description BINDING => ECO:0000250|UniProtKB:P03300
source Swiss-Prot : SWS_FT_FI1


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