eF-site ID 1tp7-A
PDB Code 1tp7
Chain A

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Title Crystal Structure of the RNA-dependent RNA Polymerase from Human Rhinovirus 16
Classification TRANSFERASE
Compound Genome polyprotein
Source Human rhinovirus 16 (HRV-16) (POLG_HRV16)
Sequence A:  GQIQISKHVKDVGLPSIHTPTKTKLQPSVFYDIFPGSKEP
AVLTEKDPRLKVDFDSALFSKYKGNTECSLNEHIQVAVAH
YSAQLATLDIDPQPIAXEDSVFGXDGLEALDLNTSAGYPY
VTLGIKKKDLINNKTKDISKLKLALDKYDVDLPXITFLKD
ELRKKDKIAAGKTRVIEASSINDTILFRTVYGNLFSKFHL
NPGVVTGCAVGCDPETFWSKIPLXLDGDCIXAFDYTNYDG
SIHPIWFKALGXVLDNLSFNPTLINRLCNSKHIFKSTYYE
VEGGVPSGCSGTSIFNSXINNIIIRTLVLDAYKHIDLDKL
KIIAYGDDVIFSYKYKLDXEAIAKEGQKYGLTITPADKSS
EFKELDYGNVTFLKRGFRQDDKYKFLIHPTFPVEEIYESI
RWTKKPSQXQEHVLSLCHLXWHNGPEIYKDFETKIRSVSA
GRALYIPPYELLRHEWYEKF
Description (1)  Genome polyprotein (E.C.2.7.7.48)


Functional site

1) chain A
residue 212
type
sequence C
description BINDING SITE FOR RESIDUE SO4 A 470
source : AC1

2) chain A
residue 213
type
sequence D
description BINDING SITE FOR RESIDUE SO4 A 470
source : AC1

3) chain A
residue 216
type
sequence T
description BINDING SITE FOR RESIDUE SO4 A 470
source : AC1

4) chain A
residue 217
type
sequence F
description BINDING SITE FOR RESIDUE SO4 A 470
source : AC1

5) chain A
residue 220
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 470
source : AC1

6) chain A
residue 222
type
sequence P
description BINDING SITE FOR RESIDUE DMX A 500
source : AC5

7) chain A
residue 366
type
sequence D
description BINDING SITE FOR RESIDUE DMX A 500
source : AC5

8) chain A
residue 367
type
sequence Y
description BINDING SITE FOR RESIDUE DMX A 500
source : AC5

9) chain A
residue 379
type
sequence Q
description BINDING SITE FOR RESIDUE DMX A 500
source : AC5

10) chain A
residue 387
type
sequence I
description BINDING SITE FOR RESIDUE DMX A 500
source : AC5

11) chain A
residue 234
type BINDING
sequence D
description BINDING => ECO:0000250|UniProtKB:P03300
source Swiss-Prot : SWS_FT_FI1

12) chain A
residue 327
type BINDING
sequence D
description BINDING => ECO:0000250|UniProtKB:P03300
source Swiss-Prot : SWS_FT_FI1


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