eF-site ID 1tf6-ABC
PDB Code 1tf6
Chain A, B, C

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Title CO-CRYSTAL STRUCTURE OF XENOPUS TFIIIA ZINC FINGER DOMAIN BOUND TO THE 5S RIBOSOMAL RNA GENE INTERNAL CONTROL REGION
Classification TRANSCRIPTION/DNA
Compound DNA (5'-D(*AP*CP*GP*GP*GP*CP*CP*TP*GP*GP*TP*TP*AP*GP*TP*AP*C P*CP*TP*GP*GP*AP* TP*GP*GP*GP*AP*GP*AP*CP*C)-3')
Source Xenopus laevis (African clawed frog) (1TF6)
Sequence A:  YKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEG
CEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKAN
MKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSH
TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDS
CSFVGKTWTLYLKHVAECH
B:  ACGGGCCTGGTTAGTACCTGGATGGGAGACC
C:  TGGTCTCCCATCCAGGTACTAACCAGGCCCG
Description


Functional site

1) chain A
residue 15
type
sequence C
description ZN-BINDING SITE.
source : AN1

2) chain A
residue 20
type
sequence C
description ZN-BINDING SITE.
source : AN1

3) chain A
residue 33
type
sequence H
description ZN-BINDING SITE.
source : AN1

4) chain A
residue 37
type
sequence H
description ZN-BINDING SITE.
source : AN1

5) chain A
residue 45
type
sequence C
description ZN-BINDING SITE.
source : AN2

6) chain A
residue 50
type
sequence C
description ZN-BINDING SITE.
source : AN2

7) chain A
residue 63
type
sequence H
description ZN-BINDING SITE.
source : AN2

8) chain A
residue 67
type
sequence H
description ZN-BINDING SITE.
source : AN2

9) chain A
residue 75
type
sequence C
description ZN-BINDING SITE.
source : AN3

10) chain A
residue 80
type
sequence C
description ZN-BINDING SITE.
source : AN3

11) chain A
residue 93
type
sequence H
description ZN-BINDING SITE.
source : AN3

12) chain A
residue 98
type
sequence H
description ZN-BINDING SITE.
source : AN3

13) chain A
residue 107
type
sequence C
description ZN-BINDING SITE.
source : AN4

14) chain A
residue 112
type
sequence C
description ZN-BINDING SITE.
source : AN4

15) chain A
residue 125
type
sequence H
description ZN-BINDING SITE.
source : AN4

16) chain A
residue 129
type
sequence H
description ZN-BINDING SITE.
source : AN4

17) chain A
residue 137
type
sequence C
description ZN-BINDING SITE.
source : AN5

18) chain A
residue 142
type
sequence C
description ZN-BINDING SITE.
source : AN5

19) chain A
residue 155
type
sequence H
description ZN-BINDING SITE.
source : AN5

20) chain A
residue 159
type
sequence H
description ZN-BINDING SITE.
source : AN5

21) chain A
residue 164
type
sequence C
description ZN-BINDING SITE.
source : AN6

22) chain A
residue 170
type
sequence C
description ZN-BINDING SITE.
source : AN6

23) chain A
residue 183
type
sequence H
description ZN-BINDING SITE.
source : AN6

24) chain A
residue 188
type
sequence H
description ZN-BINDING SITE.
source : AN6

25) chain A
residue 15
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 201
source : AC1

26) chain A
residue 20
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 201
source : AC1

27) chain A
residue 33
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 201
source : AC1

28) chain A
residue 37
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 201
source : AC1

29) chain A
residue 45
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 202
source : AC2

30) chain A
residue 50
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 202
source : AC2

31) chain A
residue 63
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 202
source : AC2

32) chain A
residue 67
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 202
source : AC2

33) chain A
residue 75
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 203
source : AC3

34) chain A
residue 77
type
sequence S
description BINDING SITE FOR RESIDUE ZN A 203
source : AC3

35) chain A
residue 80
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 203
source : AC3

36) chain A
residue 93
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 203
source : AC3

37) chain A
residue 98
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 203
source : AC3

38) chain A
residue 107
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 204
source : AC4

39) chain A
residue 112
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 204
source : AC4

40) chain A
residue 125
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 204
source : AC4

41) chain A
residue 129
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 204
source : AC4

42) chain A
residue 137
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 205
source : AC5

43) chain A
residue 142
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 205
source : AC5

44) chain A
residue 155
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 205
source : AC5

45) chain A
residue 159
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 205
source : AC5

46) chain A
residue 164
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 206
source : AC6

47) chain A
residue 170
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 206
source : AC6

48) chain A
residue 183
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 206
source : AC6

49) chain A
residue 188
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 206
source : AC6

50) chain A
residue 73-98
type ZN_FING
sequence FTCDSDGCDLRFTTKANMKKHFNRFH
description C2H2-type 3 => ECO:0000255|PROSITE-ProRule:PRU00042
source Swiss-Prot : SWS_FT_FI3

51) chain A
residue 105-129
type ZN_FING
sequence YVCHFENCGKAFKKHNQLKVHQFSH
description C2H2-type 4 => ECO:0000255|PROSITE-ProRule:PRU00042
source Swiss-Prot : SWS_FT_FI4

52) chain A
residue 135-159
type ZN_FING
sequence YECPHEGCDKRFSLPSRLKRHEKVH
description C2H2-type 5 => ECO:0000255|PROSITE-ProRule:PRU00042
source Swiss-Prot : SWS_FT_FI5

53) chain A
residue 162-188
type ZN_FING
sequence YPCKKDDSCSFVGKTWTLYLKHVAECH
description C2H2-type 6 => ECO:0000255|PROSITE-ProRule:PRU00042
source Swiss-Prot : SWS_FT_FI6

54) chain A
residue 16
type MOD_RES
sequence S
description Phosphoserine; by CK2 => ECO:0000269|PubMed:11853545
source Swiss-Prot : SWS_FT_FI7

55) chain A
residue 15-37
type prosite
sequence CSFADCGAAYNKNWKLQAHLCKH
description ZINC_FINGER_C2H2_1 Zinc finger C2H2 type domain signature. CsfadCgaaYnknwklqaHlck..H
source prosite : PS00028

56) chain A
residue 45-67
type prosite
sequence CKEEGCEKGFTSLHHLTRHSLTH
description ZINC_FINGER_C2H2_1 Zinc finger C2H2 type domain signature. CsfadCgaaYnknwklqaHlck..H
source prosite : PS00028

57) chain A
residue 75-98
type prosite
sequence CDSDGCDLRFTTKANMKKHFNRFH
description ZINC_FINGER_C2H2_1 Zinc finger C2H2 type domain signature. CsfadCgaaYnknwklqaHlck..H
source prosite : PS00028

58) chain A
residue 107-129
type prosite
sequence CHFENCGKAFKKHNQLKVHQFSH
description ZINC_FINGER_C2H2_1 Zinc finger C2H2 type domain signature. CsfadCgaaYnknwklqaHlck..H
source prosite : PS00028

59) chain A
residue 137-159
type prosite
sequence CPHEGCDKRFSLPSRLKRHEKVH
description ZINC_FINGER_C2H2_1 Zinc finger C2H2 type domain signature. CsfadCgaaYnknwklqaHlck..H
source prosite : PS00028

60) chain A
residue 13-37
type ZN_FING
sequence YICSFADCGAAYNKNWKLQAHLCKH
description C2H2-type 1 => ECO:0000255|PROSITE-ProRule:PRU00042
source Swiss-Prot : SWS_FT_FI1

61) chain A
residue 43-67
type ZN_FING
sequence FPCKEEGCEKGFTSLHHLTRHSLTH
description C2H2-type 2 => ECO:0000255|PROSITE-ProRule:PRU00042
source Swiss-Prot : SWS_FT_FI2


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