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eF-site ID
|
1tf5-A |
PDB Code
|
1tf5 |
Chain
|
A |
|
click to enlarge
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Title
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Crystal structure of SecA in an open conformation from Bacillus Subtilis |
Classification
|
PROTEIN TRANSPORT |
Compound
|
Preprotein translocase secA subunit |
Source
|
Bacillus subtilis (SECA_BACSU) |
|
Sequence
|
A: |
HMLGILNKRTLNRYEKIANDIDAIRGDYENLSDDALKHKT
IEFKERLEKGATTDDLLVEAFAVVREASRRVTGMFPFKVQ
LMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVH
VVTVNEYLASRDAEQMGKIFEFLGLTVGLNLNSMSKDEKR
EAYAADITYSTNNELGFDYLRDNMVLYKEQMVQRPLHFAV
IDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLK
AEKDYTYDIKTKAVQLTEEGMTKAEKAFGIDNLFDVKHVA
LNHHINQALKAHVAMQKDVDYVVEDGQVVIVDSFTGRLMK
GRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYE
KLAGMTGTAKTEEEEFRNIYNMQVVTIPTNRPVVRDDRPD
LIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVAVETSELI
SKLLKNKGIPHQVLNAKNHEREAQIIEEAGQKGAVTIATN
MAGRGTDIKLGEGVKELGGLAVVGTERHESRRIDNQLRGR
SGRQGDPGITQFYLSMEDELMRRFGAERTMAMLDRFGMDD
STPIQSKMVSRAVESSQKRVEGNNFDSRKQLLQYDDVLRQ
QREVIYKQRFEVIDSENLREIVENMIKSSLERAIAAYTPR
EELPEEWKLDGLVDLINTTYLDEGALEKSDIFGKEPDEML
ELIMDRIITKYNEKEEQFGKEQMREFEKVIVLRAVDSKWM
DHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIE
SIEDEVAKFVMKAEI
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Description
|
|
Functional site
|
|
1)
|
chain |
A |
residue |
79 |
type |
BINDING |
sequence |
M
|
description |
BINDING => ECO:0000269|PubMed:15256599, ECO:0000269|PubMed:19850053, ECO:0007744|PDB:1TF2, ECO:0007744|PDB:3JV2
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
2)
|
chain |
A |
residue |
85 |
type |
BINDING |
sequence |
Q
|
description |
BINDING => ECO:0000255|HAMAP-Rule:MF_01382, ECO:0000269|PubMed:12242434, ECO:0000269|PubMed:15256599, ECO:0000269|PubMed:16989859, ECO:0000269|PubMed:19850053, ECO:0007744|PDB:1M74, ECO:0007744|PDB:1TF2, ECO:0007744|PDB:2IBM, ECO:0007744|PDB:3JV2
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
3)
|
chain |
A |
residue |
103 |
type |
BINDING |
sequence |
G
|
description |
BINDING => ECO:0000255|HAMAP-Rule:MF_01382, ECO:0000269|PubMed:12242434, ECO:0000269|PubMed:15256599, ECO:0000269|PubMed:16989859, ECO:0000269|PubMed:19850053, ECO:0007744|PDB:1M74, ECO:0007744|PDB:1TF2, ECO:0007744|PDB:2IBM, ECO:0007744|PDB:3JV2
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
4)
|
chain |
A |
residue |
492 |
type |
BINDING |
sequence |
D
|
description |
BINDING => ECO:0000255|HAMAP-Rule:MF_01382, ECO:0000269|PubMed:12242434, ECO:0000269|PubMed:15256599, ECO:0000269|PubMed:16989859, ECO:0007744|PDB:1M74, ECO:0007744|PDB:1TF2, ECO:0007744|PDB:2IBM
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
5)
|
chain |
A |
residue |
480-495 |
type |
prosite |
sequence |
VTIATNMAGRGTDIKL
|
description |
SECA SecA family signature. VtIATNMAGRGtDIkL
|
source |
prosite : PS01312
|
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