eF-site ID 1svo-AB
PDB Code 1svo
Chain A, B

click to enlarge
Title Structure of SV40 large T antigen helicase domain
Classification VIRAL PROTEIN
Compound large T antigen
Source Simian virus 40 (SV40) (TALA_SV40)
Sequence A:  KQVSWKLVTEYAMETKCDDVLLLLGMYLEFQYSFEMCLKC
IKKEQPSHYKYHEKHYANAAIFADSKNQKTICQQAVDTVL
AKKRVDSLQLTREQMLTNRFNDLLDRMDIMFGSTGSADIE
EWMAGVAWLHCLLPKMDSVVYDFLKCMVYNIPKKRYWLFK
GPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVAI
DQFLVVFEDVKGTGGESRDLPSGQGINNLDNLRDYLDGSV
KVNLEKKHLNKRTQIFPPGIVTMNEYSVPKTLQARFVKQI
DFRPKDYLKHCLERSEFLLEKRIIQSGIALLLMLIWYRPV
AEFAQSIQSRIVEWKERLDKEFSLSVYQKMKFNVAMGIGV
LD
B:  KQVSWKLVTEYAMETKCDDVLLLLGMYLEFQYSFEMCLKC
IKKEQPSHYKYHEKHYANAAIFADSKNQKTICQQAVDTVL
AKKRVDSLQLTREQMLTNRFNDLLDRMDIMFGSTGSADIE
EWMAGVAWLHCLLPKMDSVVYDFLKCMVYNIPKKRYWLFK
GPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVAI
DQFLVVFEDVKGTGGESRDLPSGQGINNLDNLRDYLDGSV
KVNLEKKHLNKRTQIFPPGIVTMNEYSVPKTLQARFVKQI
DFRPKDYLKHCLERSEFLLEKRIIQSGIALLLMLIWYRPV
AEFAQSIQSRIVEWKERLDKEFSLSVYQKMKFNVAMGIGV
LD
Description (1)  large T antigen


Functional site

1) chain A
residue 302
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 700
source : AC1

2) chain A
residue 305
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 700
source : AC1

3) chain A
residue 313
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 700
source : AC1

4) chain A
residue 317
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 700
source : AC1

5) chain B
residue 302
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 700
source : AC2

6) chain B
residue 305
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 700
source : AC2

7) chain B
residue 313
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 700
source : AC2

8) chain B
residue 317
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 700
source : AC2

9) chain A
residue 302
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

10) chain A
residue 305
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

11) chain A
residue 313
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

12) chain A
residue 317
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

13) chain B
residue 302
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

14) chain B
residue 305
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

15) chain B
residue 313
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

16) chain B
residue 317
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

17) chain A
residue 426
type BINDING
sequence G
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00551
source Swiss-Prot : SWS_FT_FI3

18) chain B
residue 426
type BINDING
sequence G
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00551
source Swiss-Prot : SWS_FT_FI3


Display surface

Download
Links