eF-site ID 1svm-F
PDB Code 1svm
Chain F

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Title Co-crystal structure of SV40 large T antigen helicase domain and ATP
Classification VIRAL PROTEIN
Compound large T antigen
Source Simian virus 40 (SV40) (TALA_SV40)
Sequence F:  TKQVSWKLVTEYAMETKCDDVLLLLGMYLEFQYSFEMCLK
CIKKEQPSHYKYHEKHYANAAIFADSKNQKTICQQAVDTV
LAKKRVDSLQLTREQMLTNRFNDLLDRMDIMFGSTGSADI
EEWMAGVAWLHCLLPKMDSVVYDFLKCMVYNIPKKRYWLF
KGPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVA
IDQFLVVFEDVKGTGGESRDLPSGQGINNLDNLRDYLDGS
VKVNLEKKHLNKRTQIFPPGIVTMNEYSVPKTLQARFVKQ
IDFRPKDYLKHCLERSEFLLEKRIIQSGIALLLMLIWYRP
VAEFAQSIQSRIVEWKERLDKEFSLSVYQKMKFNVAMGIG
VLD
Description


Functional site

1) chain F
residue 302
type
sequence C
description BINDING SITE FOR RESIDUE ZN F 700
source : AC6

2) chain F
residue 305
type
sequence C
description BINDING SITE FOR RESIDUE ZN F 700
source : AC6

3) chain F
residue 313
type
sequence H
description BINDING SITE FOR RESIDUE ZN F 700
source : AC6

4) chain F
residue 317
type
sequence H
description BINDING SITE FOR RESIDUE ZN F 700
source : AC6

5) chain F
residue 433
type
sequence T
description BINDING SITE FOR RESIDUE MG F 750
source : BC3

6) chain F
residue 418
type
sequence K
description BINDING SITE FOR RESIDUE ATP A 800
source : BC4

7) chain F
residue 540
type
sequence R
description BINDING SITE FOR RESIDUE ATP A 800
source : BC4

8) chain F
residue 397
type
sequence L
description BINDING SITE FOR RESIDUE ATP F 800
source : BC9

9) chain F
residue 428
type
sequence I
description BINDING SITE FOR RESIDUE ATP F 800
source : BC9

10) chain F
residue 429
type
sequence D
description BINDING SITE FOR RESIDUE ATP F 800
source : BC9

11) chain F
residue 430
type
sequence S
description BINDING SITE FOR RESIDUE ATP F 800
source : BC9

12) chain F
residue 431
type
sequence G
description BINDING SITE FOR RESIDUE ATP F 800
source : BC9

13) chain F
residue 432
type
sequence K
description BINDING SITE FOR RESIDUE ATP F 800
source : BC9

14) chain F
residue 433
type
sequence T
description BINDING SITE FOR RESIDUE ATP F 800
source : BC9

15) chain F
residue 434
type
sequence T
description BINDING SITE FOR RESIDUE ATP F 800
source : BC9

16) chain F
residue 474
type
sequence D
description BINDING SITE FOR RESIDUE ATP F 800
source : BC9

17) chain F
residue 529
type
sequence N
description BINDING SITE FOR RESIDUE ATP F 800
source : BC9

18) chain F
residue 548
type
sequence R
description BINDING SITE FOR RESIDUE ATP F 800
source : BC9

19) chain F
residue 549
type
sequence P
description BINDING SITE FOR RESIDUE ATP F 800
source : BC9

20) chain F
residue 550
type
sequence K
description BINDING SITE FOR RESIDUE ATP F 800
source : BC9

21) chain F
residue 553
type
sequence L
description BINDING SITE FOR RESIDUE ATP F 800
source : BC9

22) chain F
residue 557
type
sequence L
description BINDING SITE FOR RESIDUE ATP F 800
source : BC9

23) chain F
residue 564
type
sequence L
description BINDING SITE FOR RESIDUE ATP F 800
source : BC9

24) chain F
residue 302
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

25) chain F
residue 305
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

26) chain F
residue 313
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

27) chain F
residue 317
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

28) chain F
residue 426
type BINDING
sequence G
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00551
source Swiss-Prot : SWS_FT_FI3

29) chain F
residue 265-357
type ZN_FING
sequence TKQVSWKLVTEYAMETKCDDVLLLLGMYLEFQYSFEMCLK
CIKKEQPSHYKYHEKHYANAAIFADSKNQKTICQQAVDTV
LAKKRVDSLQLTR
description T-ag D1-type => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI1


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