eF-site ID 1svm-D
PDB Code 1svm
Chain D

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Title Co-crystal structure of SV40 large T antigen helicase domain and ATP
Classification VIRAL PROTEIN
Compound large T antigen
Source Simian virus 40 (SV40) (TALA_SV40)
Sequence D:  KQVSWKLVTEYAMETKCDDVLLLLGMYLEFQYSFEMCLKC
IKKEQPSHYKYHEKHYANAAIFADSKNQKTICQQAVDTVL
AKKRVDSLQLTREQMLTNRFNDLLDRMDIMFGSTGSADIE
EWMAGVAWLHCLLPKMDSVVYDFLKCMVYNIPKKRYWLFK
GPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVAI
DQFLVVFEDVKGTGGESRDLPSGQGINNLDNLRDYLDGSV
KVNLEKKHLNKRTQIFPPGIVTMNEYSVPKTLQARFVKQI
DFRPKDYLKHCLERSEFLLEKRIIQSGIALLLMLIWYRPV
AEFAQSIQSRIVEWKERLDKEFSLSVYQKMKFNVAMGIGV
LD
Description


Functional site

1) chain D
residue 302
type
sequence C
description BINDING SITE FOR RESIDUE ZN D 700
source : AC4

2) chain D
residue 305
type
sequence C
description BINDING SITE FOR RESIDUE ZN D 700
source : AC4

3) chain D
residue 313
type
sequence H
description BINDING SITE FOR RESIDUE ZN D 700
source : AC4

4) chain D
residue 317
type
sequence H
description BINDING SITE FOR RESIDUE ZN D 700
source : AC4

5) chain D
residue 433
type
sequence T
description BINDING SITE FOR RESIDUE MG D 750
source : BC1

6) chain D
residue 397
type
sequence L
description BINDING SITE FOR RESIDUE ATP D 800
source : BC7

7) chain D
residue 428
type
sequence I
description BINDING SITE FOR RESIDUE ATP D 800
source : BC7

8) chain D
residue 429
type
sequence D
description BINDING SITE FOR RESIDUE ATP D 800
source : BC7

9) chain D
residue 430
type
sequence S
description BINDING SITE FOR RESIDUE ATP D 800
source : BC7

10) chain D
residue 431
type
sequence G
description BINDING SITE FOR RESIDUE ATP D 800
source : BC7

11) chain D
residue 432
type
sequence K
description BINDING SITE FOR RESIDUE ATP D 800
source : BC7

12) chain D
residue 433
type
sequence T
description BINDING SITE FOR RESIDUE ATP D 800
source : BC7

13) chain D
residue 434
type
sequence T
description BINDING SITE FOR RESIDUE ATP D 800
source : BC7

14) chain D
residue 474
type
sequence D
description BINDING SITE FOR RESIDUE ATP D 800
source : BC7

15) chain D
residue 529
type
sequence N
description BINDING SITE FOR RESIDUE ATP D 800
source : BC7

16) chain D
residue 548
type
sequence R
description BINDING SITE FOR RESIDUE ATP D 800
source : BC7

17) chain D
residue 549
type
sequence P
description BINDING SITE FOR RESIDUE ATP D 800
source : BC7

18) chain D
residue 550
type
sequence K
description BINDING SITE FOR RESIDUE ATP D 800
source : BC7

19) chain D
residue 553
type
sequence L
description BINDING SITE FOR RESIDUE ATP D 800
source : BC7

20) chain D
residue 557
type
sequence L
description BINDING SITE FOR RESIDUE ATP D 800
source : BC7

21) chain D
residue 564
type
sequence L
description BINDING SITE FOR RESIDUE ATP D 800
source : BC7

22) chain D
residue 418
type
sequence K
description BINDING SITE FOR RESIDUE ATP E 800
source : BC8

23) chain D
residue 540
type
sequence R
description BINDING SITE FOR RESIDUE ATP E 800
source : BC8

24) chain D
residue 302
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

25) chain D
residue 305
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

26) chain D
residue 313
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

27) chain D
residue 317
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

28) chain D
residue 426
type BINDING
sequence G
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00551
source Swiss-Prot : SWS_FT_FI3


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