eF-site ID 1svl-ABC
PDB Code 1svl
Chain A, B, C

click to enlarge
Title Co-crystal structure of SV40 large T antigen helicase domain and ADP
Classification VIRAL PROTEIN
Compound large T antigen
Source Simian virus 40 (SV40) (TALA_SV40)
Sequence A:  TKQVSWKLVTEYAMETKCDDVLLLLGMYLEFQYSFEMCLK
CIKKEQPSHYKYHEKHYANAAIFADSKNQKTICQQAVDTV
LAKKRVDSLQLTREQMLTNRFNDLLDRMDIMFGSTGSADI
EEWMAGVAWLHCLLPKMDSVVYDFLKCMVYNIPKKRYWLF
KGPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVA
IDQFLVVFEDVKGTGGESRDLPSGQGINNLDNLRDYLDGS
VKVNLEKKHLNKRTQIFPPGIVTMNEYSVPKTLQARFVKQ
IDFRPKDYLKHCLERSEFLLEKRIIQSGIALLLMLIWYRP
VAEFAQSIQSRIVEWKERLDKEFSLSVYQKMKFNVAMGIG
VLD
B:  KQVSWKLVTEYAMETKCDDVLLLLGMYLEFQYSFEMCLKC
IKKEQPSHYKYHEKHYANAAIFADSKNQKTICQQAVDTVL
AKKRVDSLQLTREQMLTNRFNDLLDRMDIMFGSTGSADIE
EWMAGVAWLHCLLPKMDSVVYDFLKCMVYNIPKKRYWLFK
GPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVAI
DQFLVVFEDVKGTGGESRDLPSGQGINNLDNLRDYLDGSV
KVNLEKKHLNKRTQIFPPGIVTMNEYSVPKTLQARFVKQI
DFRPKDYLKHCLERSEFLLEKRIIQSGIALLLMLIWYRPV
AEFAQSIQSRIVEWKERLDKEFSLSVYQKMKFNVAMGIGV
LD
C:  KQVSWKLVTEYAMETKCDDVLLLLGMYLEFQYSFEMCLKC
IKKEQPSHYKYHEKHYANAAIFADSKNQKTICQQAVDTVL
AKKRVDSLQLTREQMLTNRFNDLLDRMDIMFGSTGSADIE
EWMAGVAWLHCLLPKMDSVVYDFLKCMVYNIPKKRYWLFK
GPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVAI
DQFLVVFEDVKGTGGESRDLPSGQGINNLDNLRDYLDGSV
KVNLEKKHLNKRTQIFPPGIVTMNEYSVPKTLQARFVKQI
DFRPKDYLKHCLERSEFLLEKRIIQSGIALLLMLIWYRPV
AEFAQSIQSRIVEWKERLDKEFSLSVYQKMKFNVAMGIGV
LD
Description


Functional site

1) chain A
residue 302
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 700
source : AC1

2) chain A
residue 305
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 700
source : AC1

3) chain A
residue 313
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 700
source : AC1

4) chain A
residue 317
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 700
source : AC1

5) chain B
residue 302
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 700
source : AC2

6) chain B
residue 305
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 700
source : AC2

7) chain B
residue 313
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 700
source : AC2

8) chain B
residue 317
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 700
source : AC2

9) chain C
residue 302
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 700
source : AC3

10) chain C
residue 305
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 700
source : AC3

11) chain C
residue 313
type
sequence H
description BINDING SITE FOR RESIDUE ZN C 700
source : AC3

12) chain C
residue 317
type
sequence H
description BINDING SITE FOR RESIDUE ZN C 700
source : AC3

13) chain A
residue 433
type
sequence T
description BINDING SITE FOR RESIDUE MG A 750
source : AC4

14) chain A
residue 473
type
sequence E
description BINDING SITE FOR RESIDUE MG A 750
source : AC4

15) chain B
residue 433
type
sequence T
description BINDING SITE FOR RESIDUE MG B 750
source : AC5

16) chain A
residue 498
type
sequence R
description BINDING SITE FOR RESIDUE MG C 750
source : AC6

17) chain C
residue 433
type
sequence T
description BINDING SITE FOR RESIDUE MG C 750
source : AC6

18) chain A
residue 428
type
sequence I
description BINDING SITE FOR RESIDUE ADP A 800
source : AC7

19) chain A
residue 429
type
sequence D
description BINDING SITE FOR RESIDUE ADP A 800
source : AC7

20) chain A
residue 430
type
sequence S
description BINDING SITE FOR RESIDUE ADP A 800
source : AC7

21) chain A
residue 431
type
sequence G
description BINDING SITE FOR RESIDUE ADP A 800
source : AC7

22) chain A
residue 432
type
sequence K
description BINDING SITE FOR RESIDUE ADP A 800
source : AC7

23) chain A
residue 433
type
sequence T
description BINDING SITE FOR RESIDUE ADP A 800
source : AC7

24) chain A
residue 434
type
sequence T
description BINDING SITE FOR RESIDUE ADP A 800
source : AC7

25) chain A
residue 548
type
sequence R
description BINDING SITE FOR RESIDUE ADP A 800
source : AC7

26) chain A
residue 549
type
sequence P
description BINDING SITE FOR RESIDUE ADP A 800
source : AC7

27) chain A
residue 550
type
sequence K
description BINDING SITE FOR RESIDUE ADP A 800
source : AC7

28) chain A
residue 553
type
sequence L
description BINDING SITE FOR RESIDUE ADP A 800
source : AC7

29) chain A
residue 557
type
sequence L
description BINDING SITE FOR RESIDUE ADP A 800
source : AC7

30) chain A
residue 564
type
sequence L
description BINDING SITE FOR RESIDUE ADP A 800
source : AC7

31) chain B
residue 418
type
sequence K
description BINDING SITE FOR RESIDUE ADP A 800
source : AC7

32) chain B
residue 397
type
sequence L
description BINDING SITE FOR RESIDUE ADP B 800
source : AC8

33) chain B
residue 428
type
sequence I
description BINDING SITE FOR RESIDUE ADP B 800
source : AC8

34) chain B
residue 429
type
sequence D
description BINDING SITE FOR RESIDUE ADP B 800
source : AC8

35) chain B
residue 430
type
sequence S
description BINDING SITE FOR RESIDUE ADP B 800
source : AC8

36) chain B
residue 431
type
sequence G
description BINDING SITE FOR RESIDUE ADP B 800
source : AC8

37) chain B
residue 432
type
sequence K
description BINDING SITE FOR RESIDUE ADP B 800
source : AC8

38) chain B
residue 433
type
sequence T
description BINDING SITE FOR RESIDUE ADP B 800
source : AC8

39) chain B
residue 434
type
sequence T
description BINDING SITE FOR RESIDUE ADP B 800
source : AC8

40) chain B
residue 548
type
sequence R
description BINDING SITE FOR RESIDUE ADP B 800
source : AC8

41) chain B
residue 549
type
sequence P
description BINDING SITE FOR RESIDUE ADP B 800
source : AC8

42) chain B
residue 550
type
sequence K
description BINDING SITE FOR RESIDUE ADP B 800
source : AC8

43) chain B
residue 553
type
sequence L
description BINDING SITE FOR RESIDUE ADP B 800
source : AC8

44) chain B
residue 557
type
sequence L
description BINDING SITE FOR RESIDUE ADP B 800
source : AC8

45) chain B
residue 564
type
sequence L
description BINDING SITE FOR RESIDUE ADP B 800
source : AC8

46) chain C
residue 418
type
sequence K
description BINDING SITE FOR RESIDUE ADP B 800
source : AC8

47) chain C
residue 498
type
sequence R
description BINDING SITE FOR RESIDUE ADP B 800
source : AC8

48) chain A
residue 418
type
sequence K
description BINDING SITE FOR RESIDUE ADP C 800
source : AC9

49) chain A
residue 498
type
sequence R
description BINDING SITE FOR RESIDUE ADP C 800
source : AC9

50) chain C
residue 397
type
sequence L
description BINDING SITE FOR RESIDUE ADP C 800
source : AC9

51) chain C
residue 427
type
sequence P
description BINDING SITE FOR RESIDUE ADP C 800
source : AC9

52) chain C
residue 428
type
sequence I
description BINDING SITE FOR RESIDUE ADP C 800
source : AC9

53) chain C
residue 429
type
sequence D
description BINDING SITE FOR RESIDUE ADP C 800
source : AC9

54) chain C
residue 430
type
sequence S
description BINDING SITE FOR RESIDUE ADP C 800
source : AC9

55) chain C
residue 431
type
sequence G
description BINDING SITE FOR RESIDUE ADP C 800
source : AC9

56) chain C
residue 432
type
sequence K
description BINDING SITE FOR RESIDUE ADP C 800
source : AC9

57) chain C
residue 433
type
sequence T
description BINDING SITE FOR RESIDUE ADP C 800
source : AC9

58) chain C
residue 434
type
sequence T
description BINDING SITE FOR RESIDUE ADP C 800
source : AC9

59) chain C
residue 548
type
sequence R
description BINDING SITE FOR RESIDUE ADP C 800
source : AC9

60) chain C
residue 549
type
sequence P
description BINDING SITE FOR RESIDUE ADP C 800
source : AC9

61) chain C
residue 550
type
sequence K
description BINDING SITE FOR RESIDUE ADP C 800
source : AC9

62) chain C
residue 553
type
sequence L
description BINDING SITE FOR RESIDUE ADP C 800
source : AC9

63) chain C
residue 557
type
sequence L
description BINDING SITE FOR RESIDUE ADP C 800
source : AC9

64) chain A
residue 265-357
type ZN_FING
sequence TKQVSWKLVTEYAMETKCDDVLLLLGMYLEFQYSFEMCLK
CIKKEQPSHYKYHEKHYANAAIFADSKNQKTICQQAVDTV
LAKKRVDSLQLTR
description T-ag D1-type => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI1

65) chain A
residue 302
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

66) chain C
residue 305
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

67) chain C
residue 313
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

68) chain C
residue 317
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

69) chain A
residue 305
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

70) chain A
residue 313
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

71) chain A
residue 317
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

72) chain B
residue 302
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

73) chain B
residue 305
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

74) chain B
residue 313
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

75) chain B
residue 317
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

76) chain C
residue 302
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00671
source Swiss-Prot : SWS_FT_FI2

77) chain A
residue 426
type BINDING
sequence G
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00551
source Swiss-Prot : SWS_FT_FI3

78) chain B
residue 426
type BINDING
sequence G
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00551
source Swiss-Prot : SWS_FT_FI3

79) chain C
residue 426
type BINDING
sequence G
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00551
source Swiss-Prot : SWS_FT_FI3


Display surface

Download
Links