|
|
eF-site ID
|
1soz-ABCDE |
|
PDB Code
|
1soz |
|
Chain
|
A, B, C, D, E |
|
click to enlarge
|
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Title
|
Crystal Structure of DegS protease in complex with an activating peptide |
|
Classification
|
HYDROLASE |
|
Compound
|
Protease degS |
|
Source
|
null (1SOZ) |
|
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Sequence
|
A: |
MTPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGS
GVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGS
DSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNP
YNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNS
GGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLA
TKIMDKLIRDGRVIRGYIGIGGRIVVNEVSPDGPAANAGI
QVNDLIISVDNKPATMDQVAEIRPGSVIPVVVLQVTIQEY
P
|
| B: |
MTPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGS
GVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGS
DSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNP
YNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNS
GGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLA
TKIMDKLIRDGRVIRGYIGIGGRIVVNEGPAANAGIQVND
LIISVDNKPAISALETMDQVAEIRPGSVIPVLQVTIQEYP
A
|
| C: |
MTPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGS
GVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGS
DSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNP
YNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNS
GGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLA
TKIMDKLIRDGRVIRGGIVVNDLIISVDNKPATMDQVAEI
RPGSVIPLQVTIQEYPA
|
| D: |
VYQF
|
| E: |
VYQF
|
|
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Description
|
|
Functional site
|
|
|
1)
|
chain |
A |
| residue |
96 |
| type |
ACT_SITE |
| sequence |
H
|
| description |
Charge relay system => ECO:0000269|PubMed:15137941, ECO:0000269|PubMed:15225661, ECO:0000269|PubMed:20739286
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
2)
|
chain |
A |
| residue |
126 |
| type |
ACT_SITE |
| sequence |
D
|
| description |
Charge relay system => ECO:0000269|PubMed:15137941, ECO:0000269|PubMed:15225661, ECO:0000269|PubMed:20739286
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
3)
|
chain |
A |
| residue |
201 |
| type |
ACT_SITE |
| sequence |
S
|
| description |
Charge relay system => ECO:0000269|PubMed:15137941, ECO:0000269|PubMed:15225661, ECO:0000269|PubMed:20739286
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
4)
|
chain |
B |
| residue |
96 |
| type |
ACT_SITE |
| sequence |
H
|
| description |
Charge relay system => ECO:0000269|PubMed:15137941, ECO:0000269|PubMed:15225661, ECO:0000269|PubMed:20739286
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
5)
|
chain |
B |
| residue |
126 |
| type |
ACT_SITE |
| sequence |
D
|
| description |
Charge relay system => ECO:0000269|PubMed:15137941, ECO:0000269|PubMed:15225661, ECO:0000269|PubMed:20739286
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
6)
|
chain |
B |
| residue |
201 |
| type |
ACT_SITE |
| sequence |
S
|
| description |
Charge relay system => ECO:0000269|PubMed:15137941, ECO:0000269|PubMed:15225661, ECO:0000269|PubMed:20739286
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
7)
|
chain |
C |
| residue |
96 |
| type |
ACT_SITE |
| sequence |
H
|
| description |
Charge relay system => ECO:0000269|PubMed:15137941, ECO:0000269|PubMed:15225661, ECO:0000269|PubMed:20739286
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
8)
|
chain |
C |
| residue |
126 |
| type |
ACT_SITE |
| sequence |
D
|
| description |
Charge relay system => ECO:0000269|PubMed:15137941, ECO:0000269|PubMed:15225661, ECO:0000269|PubMed:20739286
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
9)
|
chain |
C |
| residue |
201 |
| type |
ACT_SITE |
| sequence |
S
|
| description |
Charge relay system => ECO:0000269|PubMed:15137941, ECO:0000269|PubMed:15225661, ECO:0000269|PubMed:20739286
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
10)
|
chain |
A |
| residue |
184 |
| type |
BINDING |
| sequence |
T
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
11)
|
chain |
A |
| residue |
259 |
| type |
BINDING |
| sequence |
I
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
12)
|
chain |
A |
| residue |
351 |
| type |
BINDING |
| sequence |
Y
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
13)
|
chain |
B |
| residue |
184 |
| type |
BINDING |
| sequence |
T
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
14)
|
chain |
B |
| residue |
259 |
| type |
BINDING |
| sequence |
I
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
15)
|
chain |
B |
| residue |
351 |
| type |
BINDING |
| sequence |
Y
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
16)
|
chain |
C |
| residue |
184 |
| type |
BINDING |
| sequence |
T
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
17)
|
chain |
C |
| residue |
351 |
| type |
BINDING |
| sequence |
Y
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
|