eF-site ID 1smy-E PDB Code 1smy Chain E click to enlarge Title Structural basis for transcription regulation by alarmone ppGpp Classification TRANSFERASE Compound DNA-directed RNA polymerase alpha chain Source ORGANISM_SCIENTIFIC: Thermus thermophilus; Sequence E:  AEPGIDKLFGMVDSKYRLTVVVAKRAQQLLRHGFKNTVLE PEERPKMQTLEGLFDDPNAETWAMKELLTGRLVFGENLVP EDRLQKEMERIYPGE Description Functional site 1) chain E residue 17 type sequence Y description BINDING SITE FOR RESIDUE MG D 9242 source : SC1 2) chain E residue 59 type sequence N description BINDING SITE FOR RESIDUE MG D 9262 source : SC9 3) chain E residue 50 type sequence T description BINDING SITE FOR RESIDUE MG E 9249 source : FD8 4) chain E residue 87 type sequence K description BINDING SITE FOR RESIDUE MG E 9275 source : FD9 5) chain E residue 81 type sequence P description BINDING SITE FOR RESIDUE MG E 9288 source : GD1 6) chain E residue 70 type sequence T description BINDING SITE FOR RESIDUE MG E 9341 source : GD2 7) chain E residue 71 type sequence G description BINDING SITE FOR RESIDUE MG E 9341 source : GD2 8) chain E residue 72 type sequence R description BINDING SITE FOR RESIDUE MG E 9341 source : GD2 9) chain E residue 73 type sequence L description BINDING SITE FOR RESIDUE MG E 9341 source : GD2 10) chain E residue 3 type sequence E description BINDING SITE FOR RESIDUE MG E 9352 source : GD3 11) chain E residue 4 type sequence P description BINDING SITE FOR RESIDUE MG E 9352 source : GD3 12) chain E residue 65 type sequence M description BINDING SITE FOR RESIDUE MG E 9352 source : GD3 13) chain E residue 84 type sequence R description BINDING SITE FOR RESIDUE MG E 9366 source : GD4 14) chain E residue 88 type sequence E description BINDING SITE FOR RESIDUE MG E 9366 source : GD4 15) chain E residue 91 type sequence R description BINDING SITE FOR RESIDUE MG E 9366 source : GD4 16) chain E residue 90 type sequence E description BINDING SITE FOR RESIDUE MG E 9373 source : GD5 17) chain E residue 96 type sequence E description BINDING SITE FOR RESIDUE MG E 9373 source : GD5 18) chain E residue 25 type sequence K description BINDING SITE FOR RESIDUE MG E 9389 source : GD6 19) chain E residue 12 type sequence M description BINDING SITE FOR RESIDUE MG E 9431 source : GD7 20) chain E residue 37 type sequence N description BINDING SITE FOR RESIDUE MG E 9432 source : GD8 21) chain E residue 38 type sequence T description BINDING SITE FOR RESIDUE MG E 9432 source : GD8 22) chain E residue 93 type sequence Y description BINDING SITE FOR RESIDUE MG E 9432 source : GD8 23) chain E residue 52 type sequence E description BINDING SITE FOR RESIDUE MG E 9494 source : HD3

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