eF-site ID 1sl6-ABCDEF
PDB Code 1sl6
Chain A, B, C, D, E, F

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Title Crystal Structure of a fragment of DC-SIGNR (containg the carbohydrate recognition domain and two repeats of the neck) complexed with Lewis-x.
Classification SUGAR BINDING PROTEIN
Compound C-type lectin DC-SIGNR
Source (AAG13815)
Sequence A:  PEKSKLQEIYQELTQLKQQQIYQELTDLKTAFERLCRHCP
KDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTA
EEQNFLQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSP
SFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDNYWIC
KKPAACFR
B:  PEKSKLQEIYQELTQLKQQQIYQELTDLKTAFERLCRHCP
KDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTA
EEQNFLQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSP
SFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDNYWIC
KKPAACFR
C:  PEKSKLQEIYQELTQLKQQQIYQELTDLKTAFERLCRHCP
KDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTA
EEQNFLQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSP
SFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDNYWIC
KKPAACFR
D:  PEKSKLQEIYQELTQLKAAQIYQELTDLKTAFERLCRHCP
KDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTA
EEQNFLQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSP
SFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDNYWIC
KKPAACFR
E:  PEKSKLQEIYQELTQLKAAQIYQELTDLKTAFERLCRHCP
KDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTA
EEQNFLQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSP
SFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDNYWIC
KKPAACFR
F:  PEKSKLQEIYQELTQLKAAQIYQELTDLKTAFERLCRHCP
KDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTA
EEQNFLQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSP
SFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDNYWIC
KKPAACFR
Description (1)  C-type lectin DC-SIGNR


Functional site

1) chain A
residue 368-389
type prosite
sequence CAEFSGSGWNDNRCDVDNYWIC
description C_TYPE_LECTIN_1 C-type lectin domain signature. CAefsgsg......WNDNRCdvdny.WIC
source prosite : PS00615

2) chain A
residue 359
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1

3) chain B
residue 366
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1

4) chain B
residue 377
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI1

5) chain B
residue 378
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI1

6) chain C
residue 359
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1

7) chain C
residue 361
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI1

8) chain C
residue 363
type BINDING
sequence S
description
source Swiss-Prot : SWS_FT_FI1

9) chain C
residue 366
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1

10) chain C
residue 377
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI1

11) chain C
residue 378
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI1

12) chain D
residue 359
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1

13) chain A
residue 361
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI1

14) chain D
residue 361
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI1

15) chain D
residue 363
type BINDING
sequence S
description
source Swiss-Prot : SWS_FT_FI1

16) chain D
residue 366
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1

17) chain D
residue 377
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI1

18) chain D
residue 378
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI1

19) chain E
residue 359
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1

20) chain E
residue 361
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI1

21) chain E
residue 363
type BINDING
sequence S
description
source Swiss-Prot : SWS_FT_FI1

22) chain E
residue 366
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1

23) chain E
residue 377
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI1

24) chain A
residue 363
type BINDING
sequence S
description
source Swiss-Prot : SWS_FT_FI1

25) chain E
residue 378
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI1

26) chain F
residue 359
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1

27) chain F
residue 361
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI1

28) chain F
residue 363
type BINDING
sequence S
description
source Swiss-Prot : SWS_FT_FI1

29) chain F
residue 366
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1

30) chain F
residue 377
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI1

31) chain F
residue 378
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI1

32) chain A
residue 366
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1

33) chain A
residue 377
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI1

34) chain A
residue 378
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI1

35) chain B
residue 359
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1

36) chain B
residue 361
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI1

37) chain B
residue 363
type BINDING
sequence S
description
source Swiss-Prot : SWS_FT_FI1

38) chain A
residue 361
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

39) chain B
residue 361
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

40) chain C
residue 361
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

41) chain D
residue 361
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

42) chain E
residue 361
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

43) chain F
residue 361
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI2


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