eF-site ID 1sfo-A PDB Code 1sfo Chain A click to enlarge Title RNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEX Classification TRANSCRIPTION/DNA-RNA HYBRID Compound RNA STRAND Source ORGANISM_COMMON: baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae; Sequence A:  GQQYSSAPLRTVKEVQFGLFSPEEVRAISVAKIRFPETMD ETQTRAKIGGLNDPRLGSIDRNLKCQTCQEGMNECPGHFG HIDLAKPVFHVGFIAKIKKVCECVCMHCGKLLLDEHNELM RQALAIKDSKKRFAAIWTLCKTKMVCETDVPSLVSRGGCG NTQPTIRKDGLKLVGSWKLRVLSTEEILNIFKHISVKDFT SLGFNEVFSRPEWMILTCLPVPPPPVRPSISFNESQRGED DLTFKLADILKANISLETLEHNGAPHHAIEEAESLLQFHV ATYMDNDIAGQPQALQKSGRPVKSIRARLKGKEGRIRGNL MGKRVDFSARTVISGDPNLELDQVGVPKSIAKTLTYPEVV TPYNIDRLTQLVRNGPNEHPGAKYVIRDSGDRIDLRYSKR AGDIQLQYGWKVERHIMDNDPVLFNRQPSLHKMSMMAHRV KVIPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSEETRAE LSQLCAVPLQIVSPQSNKPCMGIVQDTLCGIRKLTLRDTF IELDQVLNMLYWVPDWDGVIPTPAIIKPKPLWSGKQILSV AIPNGIHLQRFDEGTTLLSPKDNGMLIIDGQIIFGVVEKK TVGSSNGGLIHVVTREKGPQVCAKLFGNIQKVVNFWLLHN GFSTGIGDTIADGPTMREITETIAEAKKKVLDVTKEAQAN LLTAKHGMTLRESFEDNVVRFLNEARDKAGRLAEVNLKDL NNVKQMVMAGSKGSFINIAQMSACVGQQSVEGKRIAFGFV DRTLPHFSKDDYSPESKGFVENSYLRGLTPQEFFFHAMGG REGLIDTAVKTAETGYIQRRLVKALEDIMVHYDNTTRNSL GNVIQFIYGEDGMDAAHIEKQSLDTIGGSDAAFEKRYRVD LLNTDHTLDPSLLESGSEILGDLKLQVLLDEEYKQLVKDR KFLREVFVDGEANWPLPVNIRRIIQNAQQTFHIDHTKPSD LTIKDIVLGVKDLQENLLVLRGKNEIIQNAQRDAVTLFCC LLRSRLATRRVLQEYRLTKQAFDWVLSNIEAQFLRSVVHP GEMVGVLAAQSIGEPATQMTLKKVTSGVPRLKEILNVAKN MKTPSLTVYLEPGHAADQEQAKLIRSAIEHTTLKSVTIAS EIYYDPDPRSTVIPEDEEIIQLHFSLQQSPWLLRLELDRA AMNDKDLTMGQVGERIKQTFKNDLFVIWSEDNDEKLIIRC RVVAEEDHMLKKIENTMLENITLRGVENIERVVMMKYDRK VPSPTGEYVKEPEWVLETDGVNLSEVMTVPGIDPTRIYTN SFIDIMEVLGIEAGRAALYKEVYNVIASDGSYVNYRHMAL LVDVMTTQGGLTSVTRHGFNRSNTGALMRCSFEETVEILF EAGASAELDDCRGVSENVILGQMAPIGTGAFDVMI Description Functional site 1) chain A residue 107 type sequence C description BINDING SITE FOR RESIDUE ZN A 1734 source : AC1 2) chain A residue 108 type sequence M description BINDING SITE FOR RESIDUE ZN A 1734 source : AC1 3) chain A residue 110 type sequence C description BINDING SITE FOR RESIDUE ZN A 1734 source : AC1 4) chain A residue 148 type sequence C description BINDING SITE FOR RESIDUE ZN A 1734 source : AC1 5) chain A residue 167 type sequence C description BINDING SITE FOR RESIDUE ZN A 1734 source : AC1 6) chain A residue 67 type sequence C description BINDING SITE FOR RESIDUE ZN A 1735 source : AC2 7) chain A residue 68 type sequence Q description BINDING SITE FOR RESIDUE ZN A 1735 source : AC2 8) chain A residue 70 type sequence C description BINDING SITE FOR RESIDUE ZN A 1735 source : AC2 9) chain A residue 77 type sequence C description BINDING SITE FOR RESIDUE ZN A 1735 source : AC2 10) chain A residue 80 type sequence H description BINDING SITE FOR RESIDUE ZN A 1735 source : AC2 11) chain A residue 481 type sequence D description BINDING SITE FOR RESIDUE MG A 2000 source : AC9 12) chain A residue 483 type sequence D description BINDING SITE FOR RESIDUE MG A 2000 source : AC9 13) chain A residue 485 type sequence D description BINDING SITE FOR RESIDUE MG A 2000 source : AC9 14) chain A residue 483 type catalytic sequence D description 788 source MCSA : MCSA1 15) chain A residue 485 type catalytic sequence D description 788 source MCSA : MCSA1 16) chain A residue 483 type ZN_FING sequence D description C4-type source Swiss-Prot : SWS_FT_FI1 17) chain A residue 485 type ZN_FING sequence D description C4-type source Swiss-Prot : SWS_FT_FI1 18) chain A residue 107 type ZN_FING sequence C description C4-type source Swiss-Prot : SWS_FT_FI1 19) chain A residue 110 type ZN_FING sequence C description C4-type source Swiss-Prot : SWS_FT_FI1 20) chain A residue 148 type ZN_FING sequence C description C4-type source Swiss-Prot : SWS_FT_FI1 21) chain A residue 167 type ZN_FING sequence C description C4-type source Swiss-Prot : SWS_FT_FI1 22) chain A residue 481 type ZN_FING sequence D description C4-type source Swiss-Prot : SWS_FT_FI1 23) chain A residue 1350 type MOD_RES sequence K description Phosphoserine => ECO:0007744|PubMed:17330950, ECO:0007744|PubMed:18407956 source Swiss-Prot : SWS_FT_FI3

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