eF-site ID 1sez-B
PDB Code 1sez
Chain B

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Title Crystal Structure of Protoporphyrinogen IX Oxidase
Classification OXIDOREDUCTASE
Compound Protoporphyrinogen oxidase, mitochondrial
Source Nicotiana tabacum (Common tobacco) (PPOM_TOBAC)
Sequence B:  AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKL
RSVSQDGLIWDEGANTXTESEGDVTFLIDSLGLREKQQFP
LSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKLQXLL
EPILWSHESVSGFFQRHFGKEVVDYLIDPFVAGTCGGDPD
SLSXHHSFPELWNLEKRFGSVILGAIRSKLSKTSANKKRQ
RGSFSFLGGXQTLTDAICKDLREDELRLNSRVLELSCSCT
EDSAIDSWSIISASPHKRQSEEESFDAVIXTAPLCDVKSX
KIAKRGNPFLLNFIPEVDYVPLSVVITTFKRENVKYPLEG
FGVLVPSKEQQHGLKTLGTLFSSXXFPDRAPNNVYLYTTF
VGGSRNRELAKASRTELKEIVTSDLKQLLGAEGEPTYVNH
LYWSKAFPLYGHNYDSVLDAIDKXEKNLPGLFYAGNHRGG
LSVGKALSSGCNAADLVISYLESVS
Description (1)  Protoporphyrinogen oxidase, mitochondrial (E.C.1.3.3.4)


Functional site

1) chain B
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

2) chain B
residue 22
type
sequence G
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

3) chain B
residue 23
type
sequence V
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

4) chain B
residue 24
type
sequence S
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

5) chain B
residue 42
type
sequence F
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

6) chain B
residue 43
type
sequence E
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

7) chain B
residue 44
type
sequence A
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

8) chain B
residue 50
type
sequence G
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

9) chain B
residue 51
type
sequence K
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

10) chain B
residue 65
type
sequence G
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

11) chain B
residue 66
type
sequence A
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

12) chain B
residue 67
type
sequence N
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

13) chain B
residue 68
type
sequence T
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

14) chain B
residue 263
type
sequence R
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

15) chain B
residue 264
type
sequence V
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

16) chain B
residue 304
type
sequence A
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

17) chain B
residue 308
type
sequence D
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

18) chain B
residue 438
type
sequence A
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

19) chain B
residue 439
type
sequence F
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

20) chain B
residue 468
type
sequence N
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

21) chain B
residue 474
type
sequence S
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

22) chain B
residue 475
type
sequence V
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

23) chain B
residue 98
type
sequence R
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

24) chain B
residue 174
type
sequence A
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

25) chain B
residue 175
type
sequence G
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

26) chain B
residue 177
type
sequence C
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

27) chain B
residue 178
type
sequence G
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

28) chain B
residue 334
type
sequence L
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

29) chain B
residue 354
type
sequence G
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

30) chain B
residue 355
type
sequence V
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

31) chain B
residue 356
type
sequence L
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

32) chain B
residue 369
type
sequence L
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

33) chain B
residue 370
type
sequence G
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

34) chain B
residue 371
type
sequence T
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

35) chain B
residue 392
type
sequence F
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

36) chain B
residue 109
type
sequence L
description BINDING SITE FOR RESIDUE TON B 605
source : AC6

37) chain B
residue 168
type
sequence L
description BINDING SITE FOR RESIDUE TON B 605
source : AC6

38) chain B
residue 172
type
sequence F
description BINDING SITE FOR RESIDUE TON B 605
source : AC6

39) chain B
residue 190
type
sequence F
description BINDING SITE FOR RESIDUE TON B 605
source : AC6

40) chain B
residue 356
type
sequence L
description BINDING SITE FOR RESIDUE TON B 605
source : AC6

41) chain B
residue 65
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1

42) chain B
residue 264
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1

43) chain B
residue 473
type BINDING
sequence L
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1

44) chain B
residue 20
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1

45) chain B
residue 43
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1

46) chain B
residue 51
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1


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