eF-site ID 1sez-AB
PDB Code 1sez
Chain A, B

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Title Crystal Structure of Protoporphyrinogen IX Oxidase
Classification OXIDOREDUCTASE
Compound Protoporphyrinogen oxidase, mitochondrial
Source null (PPOM_TOBAC)
Sequence A:  AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKL
RSVSQDGLIWDEGANTXTESEGDVTFLIDSLGLREKQQFP
LSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKLQXLL
EPILWSHESVSGFFQRHFGKEVVDYLIDPFVAGTCGGDPD
SLSXHHSFPELWNLEKRFGSVILGAIRSKLSKTSANKKRQ
RGSFSFLGGXQTLTDAICKDLREDELRLNSRVLELSCSCT
EDSAIDSWSIISASPHKRQSEEESFDAVIXTAPLCDVKSX
KIAKRGNPFLLNFIPEVDYVPLSVVITTFKRENVKYPLEG
FGVLVPSKEQQHGLKTLGTLFSSXXFPDRAPNNVYLYTTF
VGGSRNRELAKASRTELKEIVTSDLKQLLGAEGEPTYVNH
LYWSKAFPLYGHNYDSVLDAIDKXEKNLPGLFYAGNHRGG
LSVGKALSSGCNAADLVISYLESVS
B:  AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKL
RSVSQDGLIWDEGANTXTESEGDVTFLIDSLGLREKQQFP
LSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKLQXLL
EPILWSHESVSGFFQRHFGKEVVDYLIDPFVAGTCGGDPD
SLSXHHSFPELWNLEKRFGSVILGAIRSKLSKTSANKKRQ
RGSFSFLGGXQTLTDAICKDLREDELRLNSRVLELSCSCT
EDSAIDSWSIISASPHKRQSEEESFDAVIXTAPLCDVKSX
KIAKRGNPFLLNFIPEVDYVPLSVVITTFKRENVKYPLEG
FGVLVPSKEQQHGLKTLGTLFSSXXFPDRAPNNVYLYTTF
VGGSRNRELAKASRTELKEIVTSDLKQLLGAEGEPTYVNH
LYWSKAFPLYGHNYDSVLDAIDKXEKNLPGLFYAGNHRGG
LSVGKALSSGCNAADLVISYLESVS
Description (1)  Protoporphyrinogen oxidase, mitochondrial (E.C.1.3.3.4)


Functional site

1) chain A
residue 19
type
sequence I
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

2) chain A
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

3) chain A
residue 22
type
sequence G
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

4) chain A
residue 23
type
sequence V
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

5) chain A
residue 24
type
sequence S
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

6) chain A
residue 42
type
sequence F
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

7) chain A
residue 43
type
sequence E
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

8) chain A
residue 44
type
sequence A
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

9) chain A
residue 50
type
sequence G
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

10) chain A
residue 51
type
sequence K
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

11) chain A
residue 65
type
sequence G
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

12) chain A
residue 66
type
sequence A
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

13) chain A
residue 67
type
sequence N
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

14) chain A
residue 68
type
sequence T
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

15) chain A
residue 263
type
sequence R
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

16) chain A
residue 264
type
sequence V
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

17) chain A
residue 304
type
sequence A
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

18) chain A
residue 308
type
sequence D
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

19) chain A
residue 336
type
sequence V
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

20) chain A
residue 438
type
sequence A
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

21) chain A
residue 439
type
sequence F
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

22) chain A
residue 468
type
sequence N
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

23) chain A
residue 474
type
sequence S
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

24) chain A
residue 475
type
sequence V
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

25) chain B
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

26) chain B
residue 22
type
sequence G
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

27) chain B
residue 23
type
sequence V
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

28) chain B
residue 24
type
sequence S
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

29) chain B
residue 42
type
sequence F
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

30) chain B
residue 43
type
sequence E
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

31) chain B
residue 44
type
sequence A
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

32) chain B
residue 50
type
sequence G
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

33) chain B
residue 51
type
sequence K
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

34) chain B
residue 65
type
sequence G
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

35) chain B
residue 66
type
sequence A
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

36) chain B
residue 67
type
sequence N
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

37) chain B
residue 68
type
sequence T
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

38) chain B
residue 263
type
sequence R
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

39) chain B
residue 264
type
sequence V
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

40) chain B
residue 304
type
sequence A
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

41) chain B
residue 308
type
sequence D
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

42) chain B
residue 438
type
sequence A
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

43) chain B
residue 439
type
sequence F
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

44) chain B
residue 468
type
sequence N
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

45) chain B
residue 474
type
sequence S
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

46) chain B
residue 475
type
sequence V
description BINDING SITE FOR RESIDUE FAD B 610
source : AC2

47) chain A
residue 98
type
sequence R
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

48) chain A
residue 174
type
sequence A
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

49) chain A
residue 175
type
sequence G
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

50) chain A
residue 177
type
sequence C
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

51) chain A
residue 178
type
sequence G
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

52) chain A
residue 334
type
sequence L
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

53) chain A
residue 354
type
sequence G
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

54) chain A
residue 356
type
sequence L
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

55) chain A
residue 369
type
sequence L
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

56) chain A
residue 370
type
sequence G
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

57) chain A
residue 371
type
sequence T
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

58) chain A
residue 372
type
sequence L
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

59) chain A
residue 392
type
sequence F
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

60) chain A
residue 109
type
sequence L
description BINDING SITE FOR RESIDUE TON A 603
source : AC4

61) chain A
residue 168
type
sequence L
description BINDING SITE FOR RESIDUE TON A 603
source : AC4

62) chain A
residue 172
type
sequence F
description BINDING SITE FOR RESIDUE TON A 603
source : AC4

63) chain A
residue 356
type
sequence L
description BINDING SITE FOR RESIDUE TON A 603
source : AC4

64) chain B
residue 98
type
sequence R
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

65) chain B
residue 174
type
sequence A
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

66) chain B
residue 175
type
sequence G
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

67) chain B
residue 177
type
sequence C
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

68) chain B
residue 178
type
sequence G
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

69) chain B
residue 334
type
sequence L
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

70) chain B
residue 354
type
sequence G
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

71) chain B
residue 355
type
sequence V
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

72) chain B
residue 356
type
sequence L
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

73) chain B
residue 369
type
sequence L
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

74) chain B
residue 370
type
sequence G
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

75) chain B
residue 371
type
sequence T
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

76) chain B
residue 392
type
sequence F
description BINDING SITE FOR RESIDUE OMN B 604
source : AC5

77) chain B
residue 109
type
sequence L
description BINDING SITE FOR RESIDUE TON B 605
source : AC6

78) chain B
residue 168
type
sequence L
description BINDING SITE FOR RESIDUE TON B 605
source : AC6

79) chain B
residue 172
type
sequence F
description BINDING SITE FOR RESIDUE TON B 605
source : AC6

80) chain B
residue 190
type
sequence F
description BINDING SITE FOR RESIDUE TON B 605
source : AC6

81) chain B
residue 356
type
sequence L
description BINDING SITE FOR RESIDUE TON B 605
source : AC6

82) chain A
residue 20
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1

83) chain A
residue 43
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1

84) chain A
residue 51
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1

85) chain A
residue 65
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1

86) chain A
residue 264
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1

87) chain B
residue 65
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1

88) chain B
residue 264
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1

89) chain B
residue 473
type BINDING
sequence L
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1

90) chain B
residue 51
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1

91) chain A
residue 473
type BINDING
sequence L
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1

92) chain B
residue 20
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1

93) chain B
residue 43
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1


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