eF-site ID 1sez-A
PDB Code 1sez
Chain A

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Title Crystal Structure of Protoporphyrinogen IX Oxidase
Classification OXIDOREDUCTASE
Compound Protoporphyrinogen oxidase, mitochondrial
Source Nicotiana tabacum (Common tobacco) (PPOM_TOBAC)
Sequence A:  AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKL
RSVSQDGLIWDEGANTXTESEGDVTFLIDSLGLREKQQFP
LSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKLQXLL
EPILWSHESVSGFFQRHFGKEVVDYLIDPFVAGTCGGDPD
SLSXHHSFPELWNLEKRFGSVILGAIRSKLSKTSANKKRQ
RGSFSFLGGXQTLTDAICKDLREDELRLNSRVLELSCSCT
EDSAIDSWSIISASPHKRQSEEESFDAVIXTAPLCDVKSX
KIAKRGNPFLLNFIPEVDYVPLSVVITTFKRENVKYPLEG
FGVLVPSKEQQHGLKTLGTLFSSXXFPDRAPNNVYLYTTF
VGGSRNRELAKASRTELKEIVTSDLKQLLGAEGEPTYVNH
LYWSKAFPLYGHNYDSVLDAIDKXEKNLPGLFYAGNHRGG
LSVGKALSSGCNAADLVISYLESVS
Description (1)  Protoporphyrinogen oxidase, mitochondrial (E.C.1.3.3.4)


Functional site

1) chain A
residue 19
type
sequence I
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

2) chain A
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

3) chain A
residue 22
type
sequence G
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

4) chain A
residue 23
type
sequence V
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

5) chain A
residue 24
type
sequence S
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

6) chain A
residue 42
type
sequence F
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

7) chain A
residue 43
type
sequence E
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

8) chain A
residue 44
type
sequence A
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

9) chain A
residue 50
type
sequence G
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

10) chain A
residue 51
type
sequence K
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

11) chain A
residue 65
type
sequence G
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

12) chain A
residue 66
type
sequence A
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

13) chain A
residue 67
type
sequence N
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

14) chain A
residue 68
type
sequence T
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

15) chain A
residue 263
type
sequence R
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

16) chain A
residue 264
type
sequence V
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

17) chain A
residue 304
type
sequence A
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

18) chain A
residue 308
type
sequence D
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

19) chain A
residue 336
type
sequence V
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

20) chain A
residue 438
type
sequence A
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

21) chain A
residue 439
type
sequence F
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

22) chain A
residue 468
type
sequence N
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

23) chain A
residue 474
type
sequence S
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

24) chain A
residue 475
type
sequence V
description BINDING SITE FOR RESIDUE FAD A 600
source : AC1

25) chain A
residue 98
type
sequence R
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

26) chain A
residue 174
type
sequence A
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

27) chain A
residue 175
type
sequence G
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

28) chain A
residue 177
type
sequence C
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

29) chain A
residue 178
type
sequence G
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

30) chain A
residue 334
type
sequence L
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

31) chain A
residue 354
type
sequence G
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

32) chain A
residue 356
type
sequence L
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

33) chain A
residue 369
type
sequence L
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

34) chain A
residue 370
type
sequence G
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

35) chain A
residue 371
type
sequence T
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

36) chain A
residue 372
type
sequence L
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

37) chain A
residue 392
type
sequence F
description BINDING SITE FOR RESIDUE OMN A 601
source : AC3

38) chain A
residue 109
type
sequence L
description BINDING SITE FOR RESIDUE TON A 603
source : AC4

39) chain A
residue 168
type
sequence L
description BINDING SITE FOR RESIDUE TON A 603
source : AC4

40) chain A
residue 172
type
sequence F
description BINDING SITE FOR RESIDUE TON A 603
source : AC4

41) chain A
residue 356
type
sequence L
description BINDING SITE FOR RESIDUE TON A 603
source : AC4

42) chain A
residue 20
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1

43) chain A
residue 43
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1

44) chain A
residue 51
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1

45) chain A
residue 65
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1

46) chain A
residue 264
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1

47) chain A
residue 473
type BINDING
sequence L
description BINDING => ECO:0000269|PubMed:15057273
source Swiss-Prot : SWS_FT_FI1


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