eF-site ID 1s32-IJ
PDB Code 1s32
Chain I, J

click to enlarge
Title Molecular Recognition of the Nucleosomal 'Supergroove'
Classification STRUCTURAL PROTEIN/DNA
Compound palindromic alpha-satellite 146 bp DNA fragment
Source Homo sapiens (Human) (A0A8J0U496_XENLA)
Sequence I:  ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGG
AAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCT
GAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTT
GGTAGAATCTGCAGGTGGATATTGAT
J:  ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGG
AAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCT
GAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTT
GGTAGAATCTGCAGGTGGATATTGAT
Description


Functional site

1) chain J
residue 246
type
sequence G
description BINDING SITE FOR RESIDUE MN J 2002
source : AC2

2) chain I
residue 70
type
sequence G
description BINDING SITE FOR RESIDUE MN I 2003
source : AC3

3) chain I
residue 71
type
sequence G
description BINDING SITE FOR RESIDUE MN I 2003
source : AC3

4) chain I
residue 134
type
sequence G
description BINDING SITE FOR RESIDUE MN I 2004
source : AC4

5) chain J
residue 280
type
sequence G
description BINDING SITE FOR RESIDUE MN J 2005
source : AC5

6) chain I
residue 100
type
sequence G
description BINDING SITE FOR RESIDUE MN I 2006
source : AC6

7) chain I
residue 39
type
sequence G
description BINDING SITE FOR RESIDUE MN I 2007
source : AC7

8) chain I
residue 40
type
sequence G
description BINDING SITE FOR RESIDUE MN I 2007
source : AC7

9) chain J
residue 266
type
sequence T
description BINDING SITE FOR RESIDUE MN J 2008
source : AC8

10) chain J
residue 267
type
sequence G
description BINDING SITE FOR RESIDUE MN J 2008
source : AC8

11) chain I
residue 121
type
sequence G
description BINDING SITE FOR RESIDUE MN I 2009
source : AC9

12) chain J
residue 217
type
sequence G
description BINDING SITE FOR RESIDUE MN J 2010
source : BC1

13) chain J
residue 227
type
sequence G
description BINDING SITE FOR RESIDUE MN J 2011
source : BC2

14) chain J
residue 185
type
sequence G
description BINDING SITE FOR RESIDUE MN J 2013
source : BC4

15) chain J
residue 186
type
sequence G
description BINDING SITE FOR RESIDUE MN J 2013
source : BC4

16) chain I
residue 137
type
sequence G
description BINDING SITE FOR RESIDUE MN I 2014
source : BC5

17) chain I
residue 138
type
sequence G
description BINDING SITE FOR RESIDUE MN I 2014
source : BC5

18) chain I
residue 31
type
sequence G
description BINDING SITE FOR RESIDUE IMT I 1601
source : CC1

19) chain I
residue 32
type
sequence T
description BINDING SITE FOR RESIDUE IMT I 1601
source : CC1

20) chain I
residue 32
type
sequence T
description BINDING SITE FOR RESIDUE PYB I 1602
source : CC2

21) chain I
residue 33
type
sequence G
description BINDING SITE FOR RESIDUE PYB I 1602
source : CC2

22) chain I
residue 33
type
sequence G
description BINDING SITE FOR RESIDUE IMT I 1603
source : CC3

23) chain I
residue 34
type
sequence T
description BINDING SITE FOR RESIDUE IMT I 1603
source : CC3

24) chain I
residue 35
type
sequence A
description BINDING SITE FOR RESIDUE IMT I 1603
source : CC3

25) chain I
residue 34
type
sequence T
description BINDING SITE FOR RESIDUE PYB I 1604
source : CC4

26) chain I
residue 35
type
sequence A
description BINDING SITE FOR RESIDUE PYB I 1604
source : CC4

27) chain I
residue 36
type
sequence T
description BINDING SITE FOR RESIDUE PYB I 1604
source : CC4

28) chain J
residue 259
type
sequence A
description BINDING SITE FOR RESIDUE ABU I 1605
source : CC5

29) chain J
residue 260
type
sequence C
description BINDING SITE FOR RESIDUE ABU I 1605
source : CC5

30) chain J
residue 259
type
sequence A
description BINDING SITE FOR RESIDUE PYB I 1606
source : CC6

31) chain J
residue 260
type
sequence C
description BINDING SITE FOR RESIDUE PYB I 1606
source : CC6

32) chain J
residue 261
type
sequence A
description BINDING SITE FOR RESIDUE PYB I 1606
source : CC6

33) chain J
residue 260
type
sequence C
description BINDING SITE FOR RESIDUE PYB I 1607
source : CC7

34) chain J
residue 261
type
sequence A
description BINDING SITE FOR RESIDUE PYB I 1607
source : CC7

35) chain J
residue 261
type
sequence A
description BINDING SITE FOR RESIDUE PYB I 1608
source : CC8

36) chain J
residue 262
type
sequence C
description BINDING SITE FOR RESIDUE PYB I 1608
source : CC8

37) chain J
residue 263
type
sequence T
description BINDING SITE FOR RESIDUE PYB I 1608
source : CC8

38) chain I
residue 31
type
sequence G
description BINDING SITE FOR RESIDUE PYB I 1609
source : CC9

39) chain J
residue 262
type
sequence C
description BINDING SITE FOR RESIDUE PYB I 1609
source : CC9

40) chain J
residue 263
type
sequence T
description BINDING SITE FOR RESIDUE PYB I 1609
source : CC9

41) chain I
residue 30
type
sequence A
description BINDING SITE FOR RESIDUE BAL I 1610
source : DC1

42) chain I
residue 31
type
sequence G
description BINDING SITE FOR RESIDUE BAL I 1610
source : DC1

43) chain J
residue 263
type
sequence T
description BINDING SITE FOR RESIDUE BAL I 1610
source : DC1

44) chain I
residue 29
type
sequence A
description BINDING SITE FOR RESIDUE DIB I 1611
source : DC2

45) chain I
residue 30
type
sequence A
description BINDING SITE FOR RESIDUE DIB I 1611
source : DC2

46) chain J
residue 265
type
sequence T
description BINDING SITE FOR RESIDUE DIB I 1611
source : DC2

47) chain J
residue 266
type
sequence T
description BINDING SITE FOR RESIDUE DIB I 1611
source : DC2

48) chain J
residue 178
type
sequence T
description BINDING SITE FOR RESIDUE IMT I 1621
source : DC3

49) chain J
residue 178
type
sequence T
description BINDING SITE FOR RESIDUE PYB I 1622
source : DC4

50) chain J
residue 179
type
sequence G
description BINDING SITE FOR RESIDUE PYB I 1622
source : DC4

51) chain J
residue 179
type
sequence G
description BINDING SITE FOR RESIDUE IMT I 1623
source : DC5

52) chain J
residue 180
type
sequence T
description BINDING SITE FOR RESIDUE IMT I 1623
source : DC5

53) chain J
residue 181
type
sequence A
description BINDING SITE FOR RESIDUE IMT I 1623
source : DC5

54) chain I
residue 113
type
sequence A
description BINDING SITE FOR RESIDUE PYB I 1624
source : DC6

55) chain J
residue 180
type
sequence T
description BINDING SITE FOR RESIDUE PYB I 1624
source : DC6

56) chain J
residue 181
type
sequence A
description BINDING SITE FOR RESIDUE PYB I 1624
source : DC6

57) chain J
residue 182
type
sequence T
description BINDING SITE FOR RESIDUE PYB I 1624
source : DC6

58) chain I
residue 113
type
sequence A
description BINDING SITE FOR RESIDUE ABU I 1625
source : DC7

59) chain J
residue 181
type
sequence A
description BINDING SITE FOR RESIDUE ABU I 1625
source : DC7

60) chain I
residue 113
type
sequence A
description BINDING SITE FOR RESIDUE PYB I 1626
source : DC8

61) chain I
residue 114
type
sequence C
description BINDING SITE FOR RESIDUE PYB I 1626
source : DC8

62) chain I
residue 115
type
sequence A
description BINDING SITE FOR RESIDUE PYB I 1626
source : DC8

63) chain I
residue 114
type
sequence C
description BINDING SITE FOR RESIDUE PYB I 1627
source : DC9

64) chain I
residue 115
type
sequence A
description BINDING SITE FOR RESIDUE PYB I 1627
source : DC9

65) chain I
residue 116
type
sequence C
description BINDING SITE FOR RESIDUE PYB I 1627
source : DC9

66) chain I
residue 115
type
sequence A
description BINDING SITE FOR RESIDUE PYB I 1628
source : EC1

67) chain I
residue 116
type
sequence C
description BINDING SITE FOR RESIDUE PYB I 1628
source : EC1

68) chain I
residue 117
type
sequence T
description BINDING SITE FOR RESIDUE PYB I 1628
source : EC1

69) chain I
residue 116
type
sequence C
description BINDING SITE FOR RESIDUE PYB I 1629
source : EC2

70) chain I
residue 117
type
sequence T
description BINDING SITE FOR RESIDUE PYB I 1629
source : EC2

71) chain I
residue 118
type
sequence T
description BINDING SITE FOR RESIDUE PYB I 1629
source : EC2

72) chain J
residue 177
type
sequence G
description BINDING SITE FOR RESIDUE PYB I 1629
source : EC2

73) chain J
residue 176
type
sequence A
description BINDING SITE FOR RESIDUE BAL I 1630
source : EC3

74) chain J
residue 177
type
sequence G
description BINDING SITE FOR RESIDUE BAL I 1630
source : EC3

75) chain I
residue 119
type
sequence T
description BINDING SITE FOR RESIDUE DIB I 1631
source : EC4

76) chain I
residue 120
type
sequence T
description BINDING SITE FOR RESIDUE DIB I 1631
source : EC4

77) chain J
residue 175
type
sequence A
description BINDING SITE FOR RESIDUE DIB I 1631
source : EC4

78) chain J
residue 176
type
sequence A
description BINDING SITE FOR RESIDUE DIB I 1631
source : EC4

79) chain I
residue 113
type
sequence A
description BINDING SITE FOR RESIDUE OGG J 1700
source : EC5

80) chain J
residue 259
type
sequence A
description BINDING SITE FOR RESIDUE OGG J 1700
source : EC5


Display surface

Download
Links