eF-site ID 1s32-D
PDB Code 1s32
Chain D

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Title Molecular Recognition of the Nucleosomal 'Supergroove'
Classification STRUCTURAL PROTEIN/DNA
Compound palindromic alpha-satellite 146 bp DNA fragment
Source Homo sapiens (Human) (A0A8J0U496_XENLA)
Sequence D:  DGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNS
FVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPG
ELAKHAVSEGTKAVTKYTSAK
Description


Functional site

1) chain D
residue 1245
type
sequence V
description BINDING SITE FOR RESIDUE MN E 2001
source : AC1

2) chain D
residue 1287
type
sequence T
description BINDING SITE FOR RESIDUE CL D 2018
source : BC9

3) chain D
residue 1288
type
sequence S
description BINDING SITE FOR RESIDUE CL D 2018
source : BC9

4) chain D
residue 1309
type CARBOHYD
sequence S
description O-linked (GlcNAc) serine => ECO:0000250|UniProtKB:P62807
source Swiss-Prot : SWS_FT_FI3

5) chain D
residue 1317
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0C1H4
source Swiss-Prot : SWS_FT_FI4

6) chain D
residue 1289-1311
type prosite
sequence REIQTAVRLLLPGELAKHAVSEG
description HISTONE_H2B Histone H2B signature. REIQTavRlLLpGELaKHAVSEG
source prosite : PS00357


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