eF-site ID 1rdt-D
PDB Code 1rdt
Chain D

click to enlarge
Title Crystal Structure of a new rexinoid bound to the RXRalpha ligand binding doamin in the RXRalpha/PPARgamma heterodimer
Classification HORMONE/GROWTH FACTOR
Compound Retinoic acid receptor RXR-alpha
Source Homo sapiens (Human) (1RDT)
Sequence D:  AESADLRALAKHLYDSYIKSFPLTKAKARAILTGKTTDKS
PFVIYDMNSLMEVAIRIFQGCQFRSVEAVQEITEYAKSIP
GFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEG
QGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDL
AIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLN
HPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMS
LHPLLQEIYKDLY
Description


Functional site

1) chain D
residue 282
type
sequence F
description BINDING SITE FOR RESIDUE 570 D 478
source : AC2

2) chain D
residue 284
type
sequence G
description BINDING SITE FOR RESIDUE 570 D 478
source : AC2

3) chain D
residue 285
type
sequence C
description BINDING SITE FOR RESIDUE 570 D 478
source : AC2

4) chain D
residue 286
type
sequence Q
description BINDING SITE FOR RESIDUE 570 D 478
source : AC2

5) chain D
residue 289
type
sequence S
description BINDING SITE FOR RESIDUE 570 D 478
source : AC2

6) chain D
residue 323
type
sequence H
description BINDING SITE FOR RESIDUE 570 D 478
source : AC2

7) chain D
residue 327
type
sequence Y
description BINDING SITE FOR RESIDUE 570 D 478
source : AC2

8) chain D
residue 330
type
sequence L
description BINDING SITE FOR RESIDUE 570 D 478
source : AC2

9) chain D
residue 341
type
sequence I
description BINDING SITE FOR RESIDUE 570 D 478
source : AC2

10) chain D
residue 348
type
sequence M
description BINDING SITE FOR RESIDUE 570 D 478
source : AC2

11) chain D
residue 363
type
sequence F
description BINDING SITE FOR RESIDUE 570 D 478
source : AC2

12) chain D
residue 449
type
sequence H
description BINDING SITE FOR RESIDUE 570 D 478
source : AC2

13) chain D
residue 465
type
sequence L
description BINDING SITE FOR RESIDUE 570 D 478
source : AC2

14) chain D
residue 469
type
sequence L
description BINDING SITE FOR RESIDUE 570 D 478
source : AC2

15) chain D
residue 473
type
sequence Y
description BINDING SITE FOR RESIDUE 570 D 478
source : AC2

16) chain D
residue 323
type MOD_RES
sequence H
description Phosphoserine => ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI1

17) chain D
residue 449
type MOD_RES
sequence H
description Phosphoserine => ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI1

18) chain D
residue 473
type MOD_RES
sequence Y
description Phosphoserine => ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI1

19) chain D
residue 224
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:36737649
source Swiss-Prot : SWS_FT_FI2


Display surface

Download
Links