eF-site ID 1rb8-FGJX PDB Code 1rb8 Chain F, G, J, X click to enlarge Title The phiX174 DNA binding protein J in two different capsid environments. Classification Virus/DNA Compound Capsid protein Source ORGANISM_SCIENTIFIC: Enterobacteria phage alpha3; Sequence F:  REIVDLSHLAFDCGMLGRLKTVSWTPVIAGDSFELDAVGA LRLSPLRRGLAIDSKVDFFTFYIPHRHVYGDQWIQFMRDG VNAQPLPSVTCNRYPDHAGYVGTIVPANNRIPKFLHQSYL NIYNNYFRAPWMPERTEANPSNLNEDDARYGFRCCHLKNI WSAPLPPETKLAEEMGIESNSIDIMGLQAAYAQLHTEQER TYFMQRYRDVISSFGGSTSYDADNRPLLVMHTDFWASGYD VDGTDQSSLGQFSGRVQQTFKHSVPRFFVPEHGVMMTLAL IRFPPISPLEHHYLAGKSQLTYTDLAGDPALIGNLPPREI SYRDLFRDGRSGIKIKVAESIWYRTHPDYVNFKYHDLHGF PFLDDAPGTSTGDNLQEAILVRHQDYDACFQSQQLLQWNK QARYNVSVYRHMPTVRDSIMTS G:  MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGS ITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCV ISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHY PIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSA KWTSGRVIGTIATTQVIHEYQVLQPLK J:  ARPGRPQPLRGTKKGARLWYVGGQQF X:  CAAA Description Functional site 1) chain F residue 13 type sequence V description BINDING SITE FOR RESIDUE DC X 5 source : AC1 2) chain F residue 14 type sequence D description BINDING SITE FOR RESIDUE DC X 5 source : AC1 3) chain F residue 16 type sequence S description BINDING SITE FOR RESIDUE DC X 5 source : AC1 4) chain F residue 43 type sequence E description BINDING SITE FOR RESIDUE DC X 5 source : AC1 5) chain F residue 415 type sequence V description BINDING SITE FOR RESIDUE DC X 5 source : AC1 6) chain F residue 416 type sequence S description BINDING SITE FOR RESIDUE DC X 5 source : AC1 7) chain F residue 417 type sequence V description BINDING SITE FOR RESIDUE DC X 5 source : AC1 8) chain X residue 4 type sequence A description BINDING SITE FOR RESIDUE DC X 5 source : AC1 9) chain F residue 274 type sequence P description BINDING SITE FOR RESIDUE DC X 6 source : AC2 10) chain F residue 275 type sequence R description BINDING SITE FOR RESIDUE DC X 6 source : AC2 11) chain F residue 277 type sequence F description BINDING SITE FOR RESIDUE DC X 7 source : AC3 12) chain F residue 38 type sequence A description BINDING SITE FOR RESIDUE DC X 8 source : AC4 13) chain F residue 39 type sequence G description BINDING SITE FOR RESIDUE DC X 8 source : AC4 14) chain F residue 420 type sequence H description BINDING SITE FOR RESIDUE DC X 8 source : AC4 15) chain J residue 36 type sequence Q description BINDING SITE FOR RESIDUE DC X 8 source : AC4 16) chain X residue 1 type sequence C description BINDING SITE FOR RESIDUE DC X 8 source : AC4 17) chain J residue 21 type sequence K description BINDING SITE FOR RESIDUE DC X 10 source : AC5

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