eF-site ID 1r9d-A
PDB Code 1r9d
Chain A

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Title Glycerol bound form of the B12-independent glycerol dehydratase from Clostridium butyricum
Classification LYASE
Compound glycerol dehydratase
Source null (Q8GEZ8_CLOBU)
Sequence A:  ISKGFSTQTERINILKAQILNAKPCVESERAILITESFKQ
TEGQPAILRRALALKHILENIPITIRDQELIVGSLTKEPR
SSQVFPEFSNKWLQDELDRLNKRTGDAFQISEESKEKLKD
VFEYWNGKTTSELATSYMTEETREAVNCDVFTVGNYYYNG
VGHVSVDYGKVLRVGFNGIINEAKEQLEKNRSIDPDFIKK
EKFLNSVIISCEAAITYVNRYAKKAKEIADNTSDAKRKAE
LNEIAKICSKVSGEGAKSFYEACQLFWFIHAIINIESNGH
SISPARFDQYMYPYYENDKNITDKFAQELIDCIWIKLNDI
NKVRDEISTKHFGGYPMYQNLIVGGQNSEGKDATNKVSYM
ALEAAVHVKLPQPSLSVRIWNKTPDEFLLRAAELTREGLG
LPAYYNDEVIIPALVSRGLTLEDARDYGIIGCVEPQKPGK
TEGWHDSAFFNLARIVELTINSGFDKNKQIGPKTQNFEEM
KSFDEFMKAYKAQMEYFVKHMCCADNCIDIAHAERAPLPF
LSSMVDNCIGKGKSLQDGGAEYNFSGPQGVGVANIGDSLV
AVKKIVFDENKITPSELKKTLNNDFKNSEEIQALLKNAPK
FGNDIDEVDNLAREGALVYCREVNKYTNPRGGNFQPGLYP
SSINVYFGSLTGATPDGRKSGQPLADGVSPSRGCDVSGPT
AACNSVSKLDHFIASNGTLFNQKFHPSALKGDNGLMNLSS
LIRSYFDQKGFHVQFNVIDKKILLAAQKNPEKYQDLIVRV
AGYSAQFISLDKSIQNDIIARTEHVM
Description


Functional site

1) chain A
residue 164
type
sequence H
description BINDING SITE FOR RESIDUE GOL A 1801
source : AC1

2) chain A
residue 281
type
sequence H
description BINDING SITE FOR RESIDUE GOL A 1801
source : AC1

3) chain A
residue 282
type
sequence S
description BINDING SITE FOR RESIDUE GOL A 1801
source : AC1

4) chain A
residue 339
type
sequence Y
description BINDING SITE FOR RESIDUE GOL A 1801
source : AC1

5) chain A
residue 432
type
sequence G
description BINDING SITE FOR RESIDUE GOL A 1801
source : AC1

6) chain A
residue 435
type
sequence E
description BINDING SITE FOR RESIDUE GOL A 1801
source : AC1

7) chain A
residue 447
type
sequence D
description BINDING SITE FOR RESIDUE GOL A 1801
source : AC1

8) chain A
residue 450
type
sequence F
description BINDING SITE FOR RESIDUE GOL A 1801
source : AC1

9) chain A
residue 640
type
sequence Y
description BINDING SITE FOR RESIDUE GOL A 1801
source : AC1

10) chain A
residue 642
type
sequence S
description BINDING SITE FOR RESIDUE GOL A 1801
source : AC1

11) chain A
residue 758-766
type prosite
sequence IVRVAGYSA
description GLY_RADICAL_1 Glycine radical domain signature. IvRVAGYSA
source prosite : PS00850


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