eF-site ID 1r5u-A PDB Code 1r5u Chain A click to enlarge Title RNA POLYMERASE II TFIIB COMPLEX Classification TRANSCRIPTION Compound DNA-directed RNA polymerase II largest subunit Source ORGANISM_COMMON: baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae; Sequence A:  VGQQYSSAPLRTVKEVQFGLFSPEEVRAISVAKIRFPETM DETQTRAKIGGLNDPRLGSIDRNLKCQTCQEGMNECPGHF GHIDLAKPVFHVGFIAKIKKVCECVCMHCGKLLLDEHNEL MRQALAIKDSKKRFAAIWTLCKTKMVCETDVPSLVSRGGC GNTQPTIRKDGLKLVGSWKLRVLSTEEILNIFKHISVKDF TSLGFNEVFSRPEWMILTCLPVPPPPVRPSEDDLTFKLAD ILKANISLETLEHNGAPHHAIEEAESLLQFHVATYMDNDI AGQPQAPVKSIRARLKGKEGRIRGNLMGKRVDFSARTVIS GDPNLELDQVGVPKSIAKTLTYPEVVTPYNIDRLTQLVRN GPNEHPGAKYVIRDSGDRIDLRYSKRAGDIQLQYGWKVER HIMDNDPVLFNRQPSLHKMSMMAHRVKVIPYSTFRLNLSV TSPYNADFDGDEMNLHVPQSEETRAELSQLCAVPLQIVSP QSNKPCMGIVQDTLCGIRKLTLRDTFIELDQVLNMLYWVP DWDGVIPTPAIIKPKPLWSGKQILSVAIPNGIHLQRFDEG TTLLSPKDNGMLIIDGQIIFGVVEKKTVGSSNGGLIHVVT REKGPQVCAKLFGNIQKVVNFWLLHNGFSTGIGDTIADGP TMREITETIAEAKKKVLDVTKEAQANLLTAKHGMTLRESF EDNVVRFLNEARDKAGRLAEVNLKDLNNVKQMVMAGSKGS FINIAQMSACVGQQSVEGKRIAFGFVDRTLPHFSKDDYSP ESKGFVENSYLRGLPQEFFFHAMGGREGLIDTAVKTAETG YIQRRLVKALEDIMVHYDNTTRNSLGNVIQFIYGEDGMDA AHIEKQSLDTIGGSDAAFEKRYRVDLLNTDHTLDPSLLES GSEILGDLKLQVLLDEEYKQLVKDRKFLREVFVDGEANWP LPVNIRRIIQNAQQTFHIDHTKPSDLTIKDIVLGVKDLQE NLLVLRGKNEIIQNAQRDAVTLFCCLLRSRLATRRVLQEY RLTKQAFDWVLSNIEAQFLRSVVHPGEMVGVLAAQSIGEP ATQMTLKKVTSGVPRLKEILNVAKNMKTPSLTVYLEPGHA ADQEQAKLIRSAIEHTTLKSVTIASEIYYDPDPRSTVIPE DEEIIQLHFSLQQSPWLLRLELDRAAMNDKDLTMGQVGER IKQTFKNDLFVIWSEDNDEKLIIRCRVVAEEDHMLKKIEN TMLENITLRGVENIERVVMMKYDRKVPSPTGEYVKEPEWV LETDGVNLSEVMTVPGIDPTRIYTNSFIDIMEVLGIEAGR AALYKEVYNVIASDGSYVNYRHMALLVDVMTTQGGLTSVT RHGFNRSNTGALMRCSFEETVEILFEAGASAELDDCRGVS ENVILGQMAPIGTGAFDVMI Description Functional site 1) chain A residue 110 type sequence C description BINDING SITE FOR RESIDUE ZN A 1734 source : AC1 2) chain A residue 148 type sequence C description BINDING SITE FOR RESIDUE ZN A 1734 source : AC1 3) chain A residue 167 type sequence C description BINDING SITE FOR RESIDUE ZN A 1734 source : AC1 4) chain A residue 67 type sequence C description BINDING SITE FOR RESIDUE ZN A 1735 source : AC2 5) chain A residue 70 type sequence C description BINDING SITE FOR RESIDUE ZN A 1735 source : AC2 6) chain A residue 77 type sequence C description BINDING SITE FOR RESIDUE ZN A 1735 source : AC2 7) chain A residue 80 type sequence H description BINDING SITE FOR RESIDUE ZN A 1735 source : AC2 8) chain A residue 481 type sequence D description BINDING SITE FOR RESIDUE MG A 1736 source : BC1 9) chain A residue 483 type sequence D description BINDING SITE FOR RESIDUE MG A 1736 source : BC1 10) chain A residue 485 type sequence D description BINDING SITE FOR RESIDUE MG A 1736 source : BC1 11) chain A residue 483 type catalytic sequence D description 788 source MCSA : MCSA1 12) chain A residue 485 type catalytic sequence D description 788 source MCSA : MCSA1 13) chain A residue 483 type ZN_FING sequence D description C4-type source Swiss-Prot : SWS_FT_FI1 14) chain A residue 485 type ZN_FING sequence D description C4-type source Swiss-Prot : SWS_FT_FI1 15) chain A residue 107 type ZN_FING sequence C description C4-type source Swiss-Prot : SWS_FT_FI1 16) chain A residue 110 type ZN_FING sequence C description C4-type source Swiss-Prot : SWS_FT_FI1 17) chain A residue 148 type ZN_FING sequence C description C4-type source Swiss-Prot : SWS_FT_FI1 18) chain A residue 167 type ZN_FING sequence C description C4-type source Swiss-Prot : SWS_FT_FI1 19) chain A residue 481 type ZN_FING sequence D description C4-type source Swiss-Prot : SWS_FT_FI1

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