eF-site ID 1r08-1234 PDB Code 1r08 Chain 1, 2, 3, 4 click to enlarge Title STRUCTURAL ANALYSIS OF ANTIVIRAL AGENTS THAT INTERACT WITH THE CAPSID OF HUMAN RHINOVIRUSES Classification VIRUS Compound HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP1) Source null (POLG_HRV14) Sequence 1:  TVASISSGPKHTQKVPILTANETGATMPVLPSDSIETRTT YMHFNGSETDVECFLGRAACVHVTEIQNKDATGIDNHREA KLFNDWKINLSSLVQLRKKLELFTYVRFDSEYTILATASQ PDSANYSSNLVVQAMYVPPGAPNPKEWDDYTWQSASNPSV FFKVGDTSRFSVPYVGLASAYNCFYDGYSHDDAETQYGIT VLNHMGSMAFRIVNEHDEHKTLVKIRVYHRAKHVEAWIPR APRALPYTSIGRTNYPKNTEPVIKKRKGDIKSY 2:  GYSDRVQQITLGNSTITTQEAANAVVCYAEWPEYLPDVDA SDVNKTSKPDTSVCRFYTLDSKTWTTGSKGWCWKLPDALK DMGVFGQNMFFHSLGRSGYTVHVQCNATKFHSGCLLVVVI PEHQLASHEGGNVSVKYTFTHPGERGIDLSSANEVGGPVK DVLYNMNGTLLGNLLIFPHQFINLRTNNTATIVIPYINSV PIDSMTRHNNVSLMVIPIAPLTVPTGATPSLPITVTIAPM CTEFSGIRSKSIVPQ 3:  GLPTTTLPGSGQFLTTDDRQSPSALPNYEPTPRIHIPGKV HNLLEIIQVDTLIPMNNTHTKDEVNSYLIPLNANRQNEQV FGTNLFIGDGVFKTTLLGEIVQYYTHWSGSLRFSLMYTGP ALSSAKLILAYTPPGARGPQDRREAMLGTHVVWDIGLQST IVMTIPWTSGVQFRYTDPDTYTSAGFLSCWYQTSLILPPE TTGQVYLLSFISACPDFKLRLMKDTQTISQTVALTE 4:  INYYKDAASTSSAGQSLSMDPSKFTEPVKDLMLKGAPALN Description Functional site 1) chain 1 residue 104 type sequence I description BINDING SITE FOR RESIDUE W42 1 900 source : AC1 2) chain 1 residue 106 type sequence L description BINDING SITE FOR RESIDUE W42 1 900 source : AC1 3) chain 1 residue 107 type sequence S description BINDING SITE FOR RESIDUE W42 1 900 source : AC1 4) chain 1 residue 116 type sequence L description BINDING SITE FOR RESIDUE W42 1 900 source : AC1 5) chain 1 residue 128 type sequence Y description BINDING SITE FOR RESIDUE W42 1 900 source : AC1 6) chain 1 residue 150 type sequence A description BINDING SITE FOR RESIDUE W42 1 900 source : AC1 7) chain 1 residue 174 type sequence P description BINDING SITE FOR RESIDUE W42 1 900 source : AC1 8) chain 1 residue 176 type sequence V description BINDING SITE FOR RESIDUE W42 1 900 source : AC1 9) chain 1 residue 186 type sequence F description BINDING SITE FOR RESIDUE W42 1 900 source : AC1 10) chain 1 residue 188 type sequence V description BINDING SITE FOR RESIDUE W42 1 900 source : AC1 11) chain 1 residue 219 type sequence N description BINDING SITE FOR RESIDUE W42 1 900 source : AC1 12) chain 1 residue 221 type sequence M description BINDING SITE FOR RESIDUE W42 1 900 source : AC1 13) chain 1 residue 224 type sequence M description BINDING SITE FOR RESIDUE W42 1 900 source : AC1 14) chain 3 residue 24 type sequence A description BINDING SITE FOR RESIDUE W42 1 900 source : AC1 15) chain 3 residue 25 type sequence L description BINDING SITE FOR RESIDUE W42 1 900 source : AC1

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