eF-site ID 1qzw-ACEG PDB Code 1qzw Chain A, C, E, G click to enlarge Title Crystal structure of the complete core of archaeal SRP and implications for inter-domain communication Classification Signaling Protein/RNA Compound 7S RNA Source Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (1QZW) Sequence A:  MLENIRDAVRKFLTGSTPYEKAVDEFIKDLQKSLISSDVN VKLVFSLTAKIKERLNKEKPPSVLERKEWFISIVYDELSK LFGGDKEPNVNPTKLPFIIMLVGVQGSGKTTTAGKLAYFY KKRGYKVGLVAADVYRPAAYDQLLQLGNQIGVQVYGEPNN QNPIEIAKKGVDIFVKNKMDIIIVDTAGRHGYGEETKLLE EMKEMYDVLKPDDVILVIDASIGQKAYDLASRFHQASPIG SVIITKMDGTAKGGGALSAVVATGATIKFIGTGEKIDELE TFNAKRFVSRILGMGDIESILEKVKGLEEYDKIQKKMEDV MEGKGKLTLRDVYAQIIALRKMGPLSKVLQHIPGLGIMLP TPSEDQLKIGEEKIRRWLAALNSMTYKELENPNIIDKSRM RRIAEGSGLEVEEVRELLEWYNNMNRLLKMVK C:  MLENIRDAVRKFLTGSTPYEKAVDEFIKDLQKSLISSDVN VKLVFSLTAKIKERLNKEKPPSVLERKEWFISIVYDELSK LFGGDKEPNVNPTKLPFIIMLVGVQGSGKTTTAGKLAYFY KKRGYKVGLVAADVYRPAAYDQLLQLGNQIGVQVYGEPNN QNPIEIAKKGVDIFVKNKMDIIIVDTAGRHGYGEETKLLE EMKEMYDVLKPDDVILVIDASIGQKAYDLASRFHQASPIG SVIITKMDGTAKGGGALSAVVATGATIKFIGTGEKIDELE TFNAKRFVSRILGMGDIESILEKVKGLEEYDKIQKKMEDV MEGKGKLTLRDVYAQIIALRKMGPLSKVLQHIPGLGIMLP TPSEDQLKIGEEKIRRWLAALNSMTYKELENPNIIDKSRM RRIAEGSGLEVEEVRELLEWYNNMNRLLKMVK E:  MLENIRDAVRKFLTGSTPYEKAVDEFIKDLQKSLISSDVN VKLVFSLTAKIKERLNKEKPPSVLERKEWFISIVYDELSK LFGGDKEPNVNPTKLPFIIMLVGVQGSGKTTTAGKLAYFY KKRGYKVGLVAADVYRPAAYDQLLQLGNQIGVQVYGEPNN QNPIEIAKKGVDIFVKNKMDIIIVDTAGRHGYGEETKLLE EMKEMYDVLKPDDVILVIDASIGQKAYDLASRFHQASPIG SVIITKMDGTAKGGGALSAVVATGATIKFIGTGEKIDELE TFNAKRFVSRILGMGDIESILEKVKGLEEYDKIQKKMEDV MEGKGKLTLRDVYAQIIALRKMGPLSKVLQHIPGLGIMLP TPSEDQLKIGEEKIRRWLAALNSMTYKELENPNIIDKSRM RRIAEGSGLEVEEVRELLEWYNNMNRLLKMVK G:  MLENIRDAVRKFLTGSTPYEKAVDEFIKDLQKSLISSDVN VKLVFSLTAKIKERLNKEKPPSVLERKEWFISIVYDELSK LFGGDKEPNVNPTKLPFIIMLVGVQGSGKTTTAGKLAYFY KKRGYKVGLVAADVYRPAAYDQLLQLGNQIGVQVYGEPNN QNPIEIAKKGVDIFVKNKMDIIIVDTAGRHGYGEETKLLE EMKEMYDVLKPDDVILVIDASIGQKAYDLASRFHQASPIG SVIITKMDGTAKGGGALSAVVATGATIKFIGTGEKIDELE TFNAKRFVSRILGMGDIESILEKVKGLEEYDKIQKKMEDV MEGKGKLTLRDVYAQIIALRKMGPLSKVLQHIPGLGIMLP TPSEDQLKIGEEKIRRWLAALNSMTYKELENPNIIDKSRM RRIAEGSGLEVEEVRELLEWYNNMNRLLKMVK Description Functional site 1) chain A residue 103 type BINDING sequence G description BINDING => ECO:0000255|HAMAP-Rule:MF_00306 source Swiss-Prot : SWS_FT_FI1 2) chain G residue 103 type BINDING sequence G description BINDING => ECO:0000255|HAMAP-Rule:MF_00306 source Swiss-Prot : SWS_FT_FI1 3) chain G residue 185 type BINDING sequence D description BINDING => ECO:0000255|HAMAP-Rule:MF_00306 source Swiss-Prot : SWS_FT_FI1 4) chain G residue 245 type BINDING sequence T description BINDING => ECO:0000255|HAMAP-Rule:MF_00306 source Swiss-Prot : SWS_FT_FI1 5) chain A residue 185 type BINDING sequence D description BINDING => ECO:0000255|HAMAP-Rule:MF_00306 source Swiss-Prot : SWS_FT_FI1 6) chain A residue 245 type BINDING sequence T description BINDING => ECO:0000255|HAMAP-Rule:MF_00306 source Swiss-Prot : SWS_FT_FI1 7) chain C residue 103 type BINDING sequence G description BINDING => ECO:0000255|HAMAP-Rule:MF_00306 source Swiss-Prot : SWS_FT_FI1 8) chain C residue 185 type BINDING sequence D description BINDING => ECO:0000255|HAMAP-Rule:MF_00306 source Swiss-Prot : SWS_FT_FI1 9) chain C residue 245 type BINDING sequence T description BINDING => ECO:0000255|HAMAP-Rule:MF_00306 source Swiss-Prot : SWS_FT_FI1 10) chain E residue 103 type BINDING sequence G description BINDING => ECO:0000255|HAMAP-Rule:MF_00306 source Swiss-Prot : SWS_FT_FI1 11) chain E residue 185 type BINDING sequence D description BINDING => ECO:0000255|HAMAP-Rule:MF_00306 source Swiss-Prot : SWS_FT_FI1 12) chain E residue 245 type BINDING sequence T description BINDING => ECO:0000255|HAMAP-Rule:MF_00306 source Swiss-Prot : SWS_FT_FI1

Display surface Download Links