eF-site ID 1qle-C
PDB Code 1qle
Chain C

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Title CRYO-STRUCTURE OF THE PARACOCCUS DENITRIFICANS FOUR-SUBUNIT CYTOCHROME C OXIDASE IN THE COMPLETELY OXIDIZED STATE COMPLEXED WITH AN ANTIBODY FV FRAGMENT
Classification OXIDOREDUCTASE/IMMUNE SYSTEM
Compound CYTOCHROME C OXIDASE POLYPEPTIDE I-BETA
Source ORGANISM_SCIENTIFIC: PARACOCCUS DENITRIFICANS;
Sequence C:  AHVKNHDYQILPPSIWPFFGAIGAFVMLTGAVAWMKGITF
FGLPVEGPWMFLIGLVGVLYVMFGWWADVVNEGETGEHTP
VVRIGLQYGFILFIMSEVMFFVAWFWAFIKNALYPMGPDS
PIKDGVWPPEGIVTFDPWHLPLINTLILLLSGVAVTWAHH
AFVLEGDRKTTINGLIVAVILGVCFTGLQAYEYSHAAFGL
ADTVYAGAFYMATGFHGAHVIIGTIFLFVCLIRLLKGQMT
QKQHVGFEAAAWYWHFVDVVWLFLFVVIYIWGR
Description


Functional site

1) chain C
residue 102
type
sequence V
description BINDING SITE FOR RESIDUE PC1 P 2
source : AC7

2) chain C
residue 106
type
sequence W
description BINDING SITE FOR RESIDUE PC1 P 2
source : AC7

3) chain C
residue 110
type
sequence K
description BINDING SITE FOR RESIDUE PC1 P 2
source : AC7

4) chain C
residue 114
type
sequence Y
description BINDING SITE FOR RESIDUE PC1 P 2
source : AC7

5) chain C
residue 121
type
sequence P
description BINDING SITE FOR RESIDUE PC1 P 2
source : AC7

6) chain C
residue 124
type
sequence D
description BINDING SITE FOR RESIDUE PC1 P 2
source : AC7

7) chain C
residue 55
type
sequence L
description BINDING SITE FOR RESIDUE PC1 P 3
source : AC8

8) chain C
residue 66
type
sequence W
description BINDING SITE FOR RESIDUE PC1 P 3
source : AC8

9) chain C
residue 69
type
sequence V
description BINDING SITE FOR RESIDUE PC1 P 3
source : AC8

10) chain C
residue 70
type
sequence V
description BINDING SITE FOR RESIDUE PC1 P 3
source : AC8

11) chain C
residue 73
type
sequence G
description BINDING SITE FOR RESIDUE PC1 P 3
source : AC8

12) chain C
residue 74
type
sequence E
description BINDING SITE FOR RESIDUE PC1 P 3
source : AC8

13) chain C
residue 78
type
sequence H
description BINDING SITE FOR RESIDUE PC1 P 3
source : AC8

14) chain C
residue 86
type
sequence L
description BINDING SITE FOR RESIDUE PC1 P 3
source : AC8

15) chain C
residue 90
type
sequence F
description BINDING SITE FOR RESIDUE PC1 P 3
source : AC8

16) chain C
residue 222
type
sequence I
description BINDING SITE FOR RESIDUE PC1 P 3
source : AC8

17) chain C
residue 225
type
sequence I
description BINDING SITE FOR RESIDUE PC1 P 3
source : AC8

18) chain C
residue 226
type
sequence F
description BINDING SITE FOR RESIDUE PC1 P 3
source : AC8

19) chain C
residue 229
type
sequence V
description BINDING SITE FOR RESIDUE PC1 P 3
source : AC8

20) chain C
residue 233
type
sequence R
description BINDING SITE FOR RESIDUE PC1 P 3
source : AC8

21) chain C
residue 238
type
sequence Q
description BINDING SITE FOR RESIDUE PC1 P 3
source : AC8

22) chain C
residue 240
type
sequence T
description BINDING SITE FOR RESIDUE PC1 P 3
source : AC8

23) chain C
residue 243
type
sequence Q
description BINDING SITE FOR RESIDUE PC1 P 3
source : AC8

24) chain C
residue 244
type
sequence H
description BINDING SITE FOR RESIDUE PC1 P 3
source : AC8

25) chain C
residue 245
type
sequence V
description BINDING SITE FOR RESIDUE PC1 P 3
source : AC8

26) chain C
residue 246
type
sequence G
description BINDING SITE FOR RESIDUE PC1 P 3
source : AC8

27) chain C
residue 78-79
type TRANSMEM
sequence HT
description Helical
source Swiss-Prot : SWS_FT_FI1

28) chain C
residue 167-168
type TRANSMEM
sequence DR
description Helical
source Swiss-Prot : SWS_FT_FI1

29) chain C
residue 238-244
type TRANSMEM
sequence QMTQKQH
description Helical
source Swiss-Prot : SWS_FT_FI1

30) chain C
residue 49-77
type TOPO_DOM
sequence WMFLIGLVGVLYVMFGWWADVVNEGETGE
description Periplasmic
source Swiss-Prot : SWS_FT_FI2

31) chain C
residue 80-115
type TOPO_DOM
sequence PVVRIGLQYGFILFIMSEVMFFVAWFWAFIKNALYP
description Periplasmic
source Swiss-Prot : SWS_FT_FI2

32) chain C
residue 140-166
type TOPO_DOM
sequence LPLINTLILLLSGVAVTWAHHAFVLEG
description Periplasmic
source Swiss-Prot : SWS_FT_FI2

33) chain C
residue 169-197
type TOPO_DOM
sequence KTTINGLIVAVILGVCFTGLQAYEYSHAA
description Periplasmic
source Swiss-Prot : SWS_FT_FI2

34) chain C
residue 204-237
type TOPO_DOM
sequence VYAGAFYMATGFHGAHVIIGTIFLFVCLIRLLKG
description Periplasmic
source Swiss-Prot : SWS_FT_FI2

35) chain C
residue 37-48
type TOPO_DOM
sequence GITFFGLPVEGP
description Periplasmic
source Swiss-Prot : SWS_FT_FI3

36) chain C
residue 116-139
type TOPO_DOM
sequence MGPDSPIKDGVWPPEGIVTFDPWH
description Periplasmic
source Swiss-Prot : SWS_FT_FI3

37) chain C
residue 198-203
type TOPO_DOM
sequence FGLADT
description Periplasmic
source Swiss-Prot : SWS_FT_FI3


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