eF-site ID 1qd6-D
PDB Code 1qd6
Chain D

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Title OUTER MEMBRANE PHOSPHOLIPASE A FROM ESCHERICHIA COLI
Classification MEMBRANE PROTEIN
Compound OUTER MEMBRANE PHOSPHOLIPASE (OMPLA)
Source Escherichia coli (strain K12) (PA1_ECOLI)
Sequence D:  TLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQ
LSLAFPLWRGILGPNSVLGASYTQKSWWQLSNSEESSPFR
ETNYEPQLFLGFATDYRFAGWTLRDVEMGYNHDSNGRSDP
TSRSWNRLYTRLMAENGNWLVEVKPWYVVGNTDDNPDITK
YMGYYQLKIGYHLGDAVLSAKGQYNWNTGYGGAELGLSYP
ITKHVRLYTQVYSGYGESLIDYNFNQTRVGVGVMLNDLF
Description


Functional site

1) chain D
residue 106
type
sequence S
description BINDING SITE FOR RESIDUE CA C 1
source : AC1

2) chain D
residue 147
type
sequence R
description BINDING SITE FOR RESIDUE CA C 2
source : AC2

3) chain D
residue 152
type
sequence S
description BINDING SITE FOR RESIDUE CA C 2
source : AC2

4) chain D
residue 39
type
sequence Y
description BINDING SITE FOR RESIDUE HDS C 270
source : AC3

5) chain D
residue 69
type
sequence F
description BINDING SITE FOR RESIDUE HDS C 270
source : AC3

6) chain D
residue 98
type
sequence W
description BINDING SITE FOR RESIDUE HDS C 270
source : AC3

7) chain D
residue 109
type
sequence F
description BINDING SITE FOR RESIDUE HDS C 270
source : AC3

8) chain D
residue 263
type
sequence V
description BINDING SITE FOR RESIDUE HDS C 270
source : AC3

9) chain D
residue 265
type
sequence L
description BINDING SITE FOR RESIDUE HDS C 270
source : AC3

10) chain D
residue 92
type
sequence Y
description BINDING SITE FOR RESIDUE HDS D 270
source : AC4

11) chain D
residue 142
type
sequence H
description BINDING SITE FOR RESIDUE HDS D 270
source : AC4

12) chain D
residue 144
type
sequence S
description BINDING SITE FOR RESIDUE HDS D 270
source : AC4

13) chain D
residue 145
type
sequence N
description BINDING SITE FOR RESIDUE HDS D 270
source : AC4

14) chain D
residue 146
type
sequence G
description BINDING SITE FOR RESIDUE HDS D 270
source : AC4

15) chain D
residue 106
type catalytic
sequence S
description 650
source MCSA : MCSA2

16) chain D
residue 142
type catalytic
sequence H
description 650
source MCSA : MCSA2

17) chain D
residue 144
type catalytic
sequence S
description 650
source MCSA : MCSA2

18) chain D
residue 146
type catalytic
sequence G
description 650
source MCSA : MCSA2

19) chain D
residue 147
type catalytic
sequence R
description 650
source MCSA : MCSA2

20) chain D
residue 152
type catalytic
sequence S
description 650
source MCSA : MCSA2

21) chain D
residue 156
type catalytic
sequence N
description 650
source MCSA : MCSA2

22) chain D
residue 33-45
type TRANSMEM
sequence YPYDTNYLIYTQT
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

23) chain D
residue 65-79
type TRANSMEM
sequence DEVKFQLSLAFPLWR
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

24) chain D
residue 86-98
type TRANSMEM
sequence SVLGASYTQKSWW
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

25) chain D
residue 109-128
type TRANSMEM
sequence FRETNYEPQLFLGFATDYRF
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

26) chain D
residue 131-144
type TRANSMEM
sequence WTLRDVEMGYNHDS
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

27) chain D
residue 154-166
type TRANSMEM
sequence SWNRLYTRLMAEN
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

28) chain D
residue 169-178
type TRANSMEM
sequence WLVEVKPWYV
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

29) chain D
residue 197-203
type TRANSMEM
sequence LKIGYHL
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

30) chain D
residue 206-214
type TRANSMEM
sequence AVLSAKGQY
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

31) chain D
residue 222-230
type TRANSMEM
sequence GAELGLSYP
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

32) chain D
residue 236-245
type TRANSMEM
sequence RLYTQVYSGY
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

33) chain D
residue 255-266
type TRANSMEM
sequence NQTRVGVGVMLN
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

34) chain D
residue 179-196
type TOPO_DOM
sequence VGNTDDNPDITKYMGYYQ
description Extracellular
source Swiss-Prot : SWS_FT_FI2

35) chain D
residue 215-221
type TOPO_DOM
sequence NWNTGYG
description Extracellular
source Swiss-Prot : SWS_FT_FI2

36) chain D
residue 246-254
type TOPO_DOM
sequence GESLIDYNF
description Extracellular
source Swiss-Prot : SWS_FT_FI2

37) chain D
residue 46-64
type TOPO_DOM
sequence SDLNKEAIASYDWAENARK
description Extracellular
source Swiss-Prot : SWS_FT_FI2

38) chain D
residue 99-108
type TOPO_DOM
sequence QLSNSEESSP
description Extracellular
source Swiss-Prot : SWS_FT_FI2

39) chain D
residue 145-153
type TOPO_DOM
sequence NGRSDPTSR
description Extracellular
source Swiss-Prot : SWS_FT_FI2

40) chain D
residue 204-205
type TOPO_DOM
sequence GD
description Periplasmic
source Swiss-Prot : SWS_FT_FI3

41) chain D
residue 231-235
type TOPO_DOM
sequence ITKHV
description Periplasmic
source Swiss-Prot : SWS_FT_FI3

42) chain D
residue 267-269
type TOPO_DOM
sequence DLF
description Periplasmic
source Swiss-Prot : SWS_FT_FI3

43) chain D
residue 80-85
type TOPO_DOM
sequence GILGPN
description Periplasmic
source Swiss-Prot : SWS_FT_FI3

44) chain D
residue 129-130
type TOPO_DOM
sequence AG
description Periplasmic
source Swiss-Prot : SWS_FT_FI3

45) chain D
residue 167-168
type TOPO_DOM
sequence GN
description Periplasmic
source Swiss-Prot : SWS_FT_FI3

46) chain D
residue 106
type BINDING
sequence S
description in dimeric form
source Swiss-Prot : SWS_FT_FI6

47) chain D
residue 147
type BINDING
sequence R
description in dimeric form
source Swiss-Prot : SWS_FT_FI6

48) chain D
residue 152
type BINDING
sequence S
description in dimeric form
source Swiss-Prot : SWS_FT_FI6

49) chain D
residue 184
type BINDING
sequence D
description in monomeric form
source Swiss-Prot : SWS_FT_FI7

50) chain D
residue 142
type ACT_SITE
sequence H
description Proton acceptor => ECO:0000305
source Swiss-Prot : SWS_FT_FI4

51) chain D
residue 144
type ACT_SITE
sequence S
description Nucleophile => ECO:0000269|PubMed:2040286
source Swiss-Prot : SWS_FT_FI5


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