|
eF-site ID
|
1pzu-BDHILMTVWXYZ |
PDB Code
|
1pzu |
Chain
|
B, D, H, I, L, M, T, V, W, X, Y, Z |
|
click to enlarge
|
|
Title
|
An asymmetric NFAT1-RHR homodimer on a pseudo-palindromic, Kappa-B site |
Classification
|
TRANSCRIPTION/DNA |
Compound
|
5'-D(*TP*TP*GP*AP*GP*GP*AP*AP*TP*TP*TP*CP*CP*A)-3' |
Source
|
Homo sapiens (Human) (1PZU) |
|
Sequence
|
B: |
WPLSSQSGSYELRIEVQPKPHHRAHYETEGSRGAVKAPTG
GHPVVQLHGYMENKPLGLQIFIGTADERILKPHAFYQVHR
ITGKTVTTTSYEKIVGNTKVLEIPLEPKNNMRATIDCAGI
LKLRNADIELRKGETDIGRKNTRVRLVFRVHIPESSGRIV
SLQTASNPIECSQELPMVERQDTDSCLVYGGQQMILTGQN
FTSESKVVFTEKTTDGQQIWEMEATVDKDKSQPNMLFVEI
PEYRNKHIRTPVKVNFYVINGKRKRSQPQHFTYHPV
|
D: |
WPLSSQSGSYELRIEVQPKPHHRAHYETEGSRGAVKAPTG
GHPVVQLHGYMENKPLGLQIFIGTADERILKPHAFYQVHR
ITGKTVTTTSYEKIVGNTKVLEIPLEPKNNMRATIDCAGI
LKLRNADIELRKGETDIGRKNTRVRLVFRVHIPESSGRIV
SLQTASNPIECSQELPMVERQDTDSCLVYGGQQMILTGQN
FTSESKVVFTEKTTDGQQIWEMEATVDKDKSQPNMLFVEI
PEYRNKHIRTPVKVNFYVINGKRKRSQPQHFTYHPV
|
H: |
WPLSSQSGSYELRIEVQPKPHHRAHYETEGSRGAVKAPTG
GHPVVQLHGYMENKPLGLQIFIGTADERILKPHAFYQVHR
ITGKTVTTTSYEKIVGNTKVLEIPLEPKNNMRATIDCAGI
LKLRNADIELRKGETDIGRKNTRVRLVFRVHIPESSGRIV
SLQTASNPIECSQELPMVERQDTDSCLVYGGQQMILTGQN
FTSESKVVFTEKTTDGQQIWEMEATVDKDKSQPNMLFVEI
PEYRNKHIRTPVKVNFYVINGKRKRSQPQHFTYHPV
|
I: |
WPLSSQSGSYELRIEVQPKPHHRAHYETEGSRGAVKAPTG
GHPVVQLHGYMENKPLGLQIFIGTADERILKPHAFYQVHR
ITGKTVTTTSYEKIVGNTKVLEIPLEPKNNMRATIDCAGI
LKLRNADIELRKGETDIGRKNTRVRLVFRVHIPESSGRIV
SLQTASNPIECSQELPMVERQDTDSCLVYGGQQMILTGQN
FTSESKVVFTEKTTDGQQIWEMEATVDKDKSQPNMLFVEI
PEYRNKHIRTPVKVNFYVINGKRKRSQPQHFTYHPV
|
L: |
WPLSSQSGSYELRIEVQPKPHHRAHYETEGSRGAVKAPTG
GHPVVQLHGYMENKPLGLQIFIGTADERILKPHAFYQVHR
ITGKTVTTTSYEKIVGNTKVLEIPLEPKNNMRATIDCAGI
LKLRNADIELRKGETDIGRKNTRVRLVFRVHIPESSGRIV
SLQTASNPIECSQELPMVERQDTDSCLVYGGQQMILTGQN
FTSESKVVFTEKTTDGQQIWEMEATVDKDKSQPNMLFVEI
PEYRNKHIRTPVKVNFYVINGKRKRSQPQHFTYHPV
|
M: |
WPLSSQSGSYELRIEVQPKPHHRAHYETEGSRGAVKAPTG
GHPVVQLHGYMENKPLGLQIFIGTADERILKPHAFYQVHR
ITGKTVTTTSYEKIVGNTKVLEIPLEPKNNMRATIDCAGI
LKLRNADIELRKGETDIGRKNTRVRLVFRVHIPESSGRIV
SLQTASNPIECSQELPMVERQDTDSCLVYGGQQMILTGQN
FTSESKVVFTEKTTDGQQIWEMEATVDKDKSQPNMLFVEI
PEYRNKHIRTPVKVNFYVINGKRKRSQPQHFTYHPV
|
T: |
TTGAGGAATTTCCA
|
V: |
TTGAGGAATTTCCA
|
W: |
AATGGAAATTCCTC
|
X: |
TTGAGGAATTTCCA
|
Y: |
AATGGAAATTCCTC
|
Z: |
AATGGAAATTCCTC
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
B |
residue |
421-428 |
type |
DNA_BIND |
sequence |
RAHYETEG
|
description |
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
2)
|
chain |
D |
residue |
421-428 |
type |
DNA_BIND |
sequence |
RAHYETEG
|
description |
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
3)
|
chain |
H |
residue |
421-428 |
type |
DNA_BIND |
sequence |
RAHYETEG
|
description |
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
4)
|
chain |
I |
residue |
421-428 |
type |
DNA_BIND |
sequence |
RAHYETEG
|
description |
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
5)
|
chain |
L |
residue |
421-428 |
type |
DNA_BIND |
sequence |
RAHYETEG
|
description |
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
6)
|
chain |
M |
residue |
421-428 |
type |
DNA_BIND |
sequence |
RAHYETEG
|
description |
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
|
|