eF-site ID 1pvq-AB
PDB Code 1pvq
Chain A, B

click to enlarge
Title BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, LNSGG BOUND TO THE ENGINEERED RECOGNITION SITE LOXM7
Classification RECOMBINATION/DNA
Compound DNA 34-MER
Source null (RECR_BPP1)
Sequence A:  TSDEVRKNLMDMFRDRQAFSEHTWKMLLSVCRSWAAWCKL
NNRKWFPAEPEDVRDYLLYLQARGLAVKTIQQHLGQLNML
HRRSGLPRPSDSNAVSLVMRRIRKENVDAGERAKQALAFE
RTDFDQVRSLMENSDRCQDIRNLAFLGIAYNTLLRLAEIA
RIRVKDISRTDGGRMLIHIGRTKTLVSTAGVEKALSLGVT
KLVERWISVSGVADDPNNYLFCRVRKNGVAAPSATSQLSN
SALGGIFGATHRLIYGAKDDSGQRYLAWSGHSARVGAARD
MARAGVSIPEIMQAGGWTNVNIVMNYIRNLDSETGAMVRL
LED
B:  TSDEVRKNLMDMFRDRQAFSEHTWKMLLSVCRSWAAWCKL
NNRKWFPAEPEDVRDYLLYLQARGLAVKTIQQHLGQLNML
HRRSGLPRPSDSNAVSLVMRRIRKENVDAGERAKQALAFE
RTDFDQVRSLMENSDRCQDIRNLAFLGIAYNTLLRLAEIA
RIRVKDISRTDGGRMLIHIGRTKTLVSTAGVEKALSLGVT
KLVERWISVSGVADDPNNYLFCRVRKNGVAAPSATSQLSN
SALGGIFGATHRLIYGAKDDSGQRYLAWSGHSARVGAARD
MARAGVSIPEIMQAGGWTNVNIVMNYIRNTGAMVRLLED
Description


Functional site

1) chain A
residue 173
type ACT_SITE
sequence R
description ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU01246
source Swiss-Prot : SWS_FT_FI1

2) chain A
residue 289
type ACT_SITE
sequence H
description ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU01246
source Swiss-Prot : SWS_FT_FI1

3) chain A
residue 292
type ACT_SITE
sequence R
description ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU01246
source Swiss-Prot : SWS_FT_FI1

4) chain A
residue 315
type ACT_SITE
sequence W
description ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU01246
source Swiss-Prot : SWS_FT_FI1

5) chain B
residue 173
type ACT_SITE
sequence R
description ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU01246
source Swiss-Prot : SWS_FT_FI1

6) chain B
residue 289
type ACT_SITE
sequence H
description ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU01246
source Swiss-Prot : SWS_FT_FI1

7) chain B
residue 292
type ACT_SITE
sequence R
description ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU01246
source Swiss-Prot : SWS_FT_FI1

8) chain B
residue 315
type ACT_SITE
sequence W
description ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU01246
source Swiss-Prot : SWS_FT_FI1

9) chain A
residue 324
type ACT_SITE
sequence Y
description O-(3'-phospho-DNA)-tyrosine intermediate => ECO:0000255|PROSITE-ProRule:PRU01246
source Swiss-Prot : SWS_FT_FI2

10) chain B
residue 324
type ACT_SITE
sequence Y
description O-(3'-phospho-DNA)-tyrosine intermediate => ECO:0000255|PROSITE-ProRule:PRU01246
source Swiss-Prot : SWS_FT_FI2


Display surface

Download
Links