eF-site ID 1pt5-AB
PDB Code 1pt5
Chain A, B

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Title Crystal structure of gene yfdW of E. coli
Classification STRUCTURAL GENOMICS,UNKNOWN FUNCTION
Compound Hypothetical protein yfdW
Source Escherichia coli (strain K12) (FCTA_ECOLI)
Sequence A:  STPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGV
GDVTRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGKE
VMEKLIREADILVENFHPGAIDHMGFTWEHIQEINPRLIF
GSIKGFDECSPYVNVKAYENVAQAAGGAASTTGFWDGPPL
VSAAALGDSNTGMHLLIGLLAALLHREKTGRGQRVTMSMQ
DAVLNLCRVKLRDQQRLDKLGYLEEYPQYPNGTFGDAVPR
GGNAGGGGQPGWILKCKGWETDPNAYIYFTIQEQNWENTC
KAIGKPEWITDPAYSTAHARQPHIFDIFAEIEKYTVTIDK
HEAVAYLTQFDIPCAPVLSMKEISLDPSLRQSGSVVEVEQ
PLRGKYLTVGCPMKFSAFTPDIKAAPLLGEHTAAVLQELG
YSDDEIAAMKQNHAI
B:  STPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGV
GDVTRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGKE
VMEKLIREADILVENFHPGAIDHMGFTWEHIQEINPRLIF
GSIKGFDECSPYVNVKAYENVAQAAGGAASTTGFWDGPPL
VSAAALGDSNTGMHLLIGLLAALLHREKTGRGQRVTMSMQ
DAVLNLCRVKLRDQQRLDKLGYLEEYPQYPNGTFGDAVPR
GGNAGGGGQPGWILKCKGWETDPNAYIYFTIQEQNWENTC
KAIGKPEWITDPAYSTAHARQPHIFDIFAEIEKYTVTIDK
HEAVAYLTQFDIPCAPVLSMKEISLDPSLRQSGSVVEVEQ
PLRGKYLTVGCPMKFSAFTPDIKAAPLLGEHTAAVLQELG
YSDDEIAAMKQNHAI
Description


Functional site

1) chain A
residue 16
type
sequence V
description BINDING SITE FOR RESIDUE ACO A 901
source : AC1

2) chain A
residue 17
type
sequence Q
description BINDING SITE FOR RESIDUE ACO A 901
source : AC1

3) chain A
residue 18
type
sequence S
description BINDING SITE FOR RESIDUE ACO A 901
source : AC1

4) chain A
residue 38
type
sequence R
description BINDING SITE FOR RESIDUE ACO A 901
source : AC1

5) chain A
residue 72
type
sequence L
description BINDING SITE FOR RESIDUE ACO A 901
source : AC1

6) chain A
residue 73
type
sequence N
description BINDING SITE FOR RESIDUE ACO A 901
source : AC1

7) chain A
residue 74
type
sequence T
description BINDING SITE FOR RESIDUE ACO A 901
source : AC1

8) chain A
residue 75
type
sequence K
description BINDING SITE FOR RESIDUE ACO A 901
source : AC1

9) chain A
residue 96
type
sequence N
description BINDING SITE FOR RESIDUE ACO A 901
source : AC1

10) chain A
residue 97
type
sequence F
description BINDING SITE FOR RESIDUE ACO A 901
source : AC1

11) chain A
residue 98
type
sequence H
description BINDING SITE FOR RESIDUE ACO A 901
source : AC1

12) chain A
residue 101
type
sequence A
description BINDING SITE FOR RESIDUE ACO A 901
source : AC1

13) chain A
residue 124
type
sequence I
description BINDING SITE FOR RESIDUE ACO A 901
source : AC1

14) chain A
residue 137
type
sequence K
description BINDING SITE FOR RESIDUE ACO A 901
source : AC1

15) chain A
residue 138
type
sequence A
description BINDING SITE FOR RESIDUE ACO A 901
source : AC1

16) chain A
residue 139
type
sequence Y
description BINDING SITE FOR RESIDUE ACO A 901
source : AC1

17) chain A
residue 140
type
sequence E
description BINDING SITE FOR RESIDUE ACO A 901
source : AC1

18) chain A
residue 169
type
sequence D
description BINDING SITE FOR RESIDUE ACO A 901
source : AC1

19) chain A
residue 200
type
sequence M
description BINDING SITE FOR RESIDUE ACO A 901
source : AC1

20) chain B
residue 248
type
sequence G
description BINDING SITE FOR RESIDUE ACO A 901
source : AC1

21) chain B
residue 249
type
sequence G
description BINDING SITE FOR RESIDUE ACO A 901
source : AC1

22) chain B
residue 273
type
sequence Q
description BINDING SITE FOR RESIDUE ACO A 901
source : AC1

23) chain B
residue 275
type
sequence Q
description BINDING SITE FOR RESIDUE ACO A 901
source : AC1

24) chain A
residue 248
type
sequence G
description BINDING SITE FOR RESIDUE ACO B 801
source : AC2

25) chain A
residue 249
type
sequence G
description BINDING SITE FOR RESIDUE ACO B 801
source : AC2

26) chain A
residue 273
type
sequence Q
description BINDING SITE FOR RESIDUE ACO B 801
source : AC2

27) chain B
residue 13
type
sequence F
description BINDING SITE FOR RESIDUE ACO B 801
source : AC2

28) chain B
residue 16
type
sequence V
description BINDING SITE FOR RESIDUE ACO B 801
source : AC2

29) chain B
residue 17
type
sequence Q
description BINDING SITE FOR RESIDUE ACO B 801
source : AC2

30) chain B
residue 18
type
sequence S
description BINDING SITE FOR RESIDUE ACO B 801
source : AC2

31) chain B
residue 38
type
sequence R
description BINDING SITE FOR RESIDUE ACO B 801
source : AC2

32) chain B
residue 72
type
sequence L
description BINDING SITE FOR RESIDUE ACO B 801
source : AC2

33) chain B
residue 73
type
sequence N
description BINDING SITE FOR RESIDUE ACO B 801
source : AC2

34) chain B
residue 74
type
sequence T
description BINDING SITE FOR RESIDUE ACO B 801
source : AC2

35) chain B
residue 75
type
sequence K
description BINDING SITE FOR RESIDUE ACO B 801
source : AC2

36) chain B
residue 96
type
sequence N
description BINDING SITE FOR RESIDUE ACO B 801
source : AC2

37) chain B
residue 97
type
sequence F
description BINDING SITE FOR RESIDUE ACO B 801
source : AC2

38) chain B
residue 98
type
sequence H
description BINDING SITE FOR RESIDUE ACO B 801
source : AC2

39) chain B
residue 101
type
sequence A
description BINDING SITE FOR RESIDUE ACO B 801
source : AC2

40) chain B
residue 124
type
sequence I
description BINDING SITE FOR RESIDUE ACO B 801
source : AC2

41) chain B
residue 137
type
sequence K
description BINDING SITE FOR RESIDUE ACO B 801
source : AC2

42) chain B
residue 138
type
sequence A
description BINDING SITE FOR RESIDUE ACO B 801
source : AC2

43) chain B
residue 139
type
sequence Y
description BINDING SITE FOR RESIDUE ACO B 801
source : AC2

44) chain B
residue 140
type
sequence E
description BINDING SITE FOR RESIDUE ACO B 801
source : AC2

45) chain B
residue 169
type
sequence D
description BINDING SITE FOR RESIDUE ACO B 801
source : AC2

46) chain B
residue 200
type
sequence M
description BINDING SITE FOR RESIDUE ACO B 801
source : AC2

47) chain A
residue 104
type BINDING
sequence H
description BINDING => ECO:0000255|HAMAP-Rule:MF_00742
source Swiss-Prot : SWS_FT_FI4

48) chain B
residue 104
type BINDING
sequence H
description BINDING => ECO:0000255|HAMAP-Rule:MF_00742
source Swiss-Prot : SWS_FT_FI4

49) chain A
residue 248
type BINDING
sequence G
description BINDING => ECO:0000305
source Swiss-Prot : SWS_FT_FI5

50) chain B
residue 248
type BINDING
sequence G
description BINDING => ECO:0000305
source Swiss-Prot : SWS_FT_FI5

51) chain A
residue 17
type BINDING
sequence Q
description
source Swiss-Prot : SWS_FT_FI2

52) chain B
residue 273
type BINDING
sequence Q
description
source Swiss-Prot : SWS_FT_FI2

53) chain A
residue 72
type BINDING
sequence L
description
source Swiss-Prot : SWS_FT_FI2

54) chain A
residue 96
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI2

55) chain A
residue 137
type BINDING
sequence K
description
source Swiss-Prot : SWS_FT_FI2

56) chain A
residue 273
type BINDING
sequence Q
description
source Swiss-Prot : SWS_FT_FI2

57) chain B
residue 17
type BINDING
sequence Q
description
source Swiss-Prot : SWS_FT_FI2

58) chain B
residue 72
type BINDING
sequence L
description
source Swiss-Prot : SWS_FT_FI2

59) chain B
residue 96
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI2

60) chain B
residue 137
type BINDING
sequence K
description
source Swiss-Prot : SWS_FT_FI2

61) chain A
residue 169
type ACT_SITE
sequence D
description Nucleophile => ECO:0000305|PubMed:12844490
source Swiss-Prot : SWS_FT_FI1

62) chain B
residue 169
type ACT_SITE
sequence D
description Nucleophile => ECO:0000305|PubMed:12844490
source Swiss-Prot : SWS_FT_FI1

63) chain A
residue 38
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00742, ECO:0000269|PubMed:14993676
source Swiss-Prot : SWS_FT_FI3

64) chain B
residue 38
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00742, ECO:0000269|PubMed:14993676
source Swiss-Prot : SWS_FT_FI3


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