eF-site ID 1pke-ABC
PDB Code 1pke
Chain A, B, C

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Title Crystal Structure of E. coli purine nucleoside phosphorylase complexed with 2-fluoro-2'-deoxyadenosine and sulfate/phosphate
Classification TRANSFERASE
Compound Purine nucleoside phosphorylase DeoD-type
Source ORGANISM_SCIENTIFIC: Escherichia coli O157:H7;
Sequence A:  ATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVN
NVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDF
GVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRF
KDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFY
SPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTIC
TVSDHIRTHEQTTAAERQTTFNDMIKIALESVLLGDK
B:  ATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVN
NVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDF
GVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRF
KDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFY
SPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTIC
TVSDHIRTHEQTTAAERQTTFNDMIKIALESVLLGDK
C:  ATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVN
NVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDF
GVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRF
KDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFY
SPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTIC
TVSDHIRTHEQTQTTFNDMIKIALESVLLGDK
Description


Functional site

1) chain A
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE PO4 A 449
source : AC1

2) chain A
residue 43
type
sequence R
description BINDING SITE FOR RESIDUE PO4 A 449
source : AC1

3) chain A
residue 87
type
sequence R
description BINDING SITE FOR RESIDUE PO4 A 449
source : AC1

4) chain A
residue 89
type
sequence G
description BINDING SITE FOR RESIDUE PO4 A 449
source : AC1

5) chain A
residue 90
type
sequence S
description BINDING SITE FOR RESIDUE PO4 A 449
source : AC1

6) chain A
residue 4
type
sequence H
description BINDING SITE FOR RESIDUE 2FD A 446
source : AC2

7) chain A
residue 43
type
sequence R
description BINDING SITE FOR RESIDUE 2FD A 446
source : AC2

8) chain A
residue 90
type
sequence S
description BINDING SITE FOR RESIDUE 2FD A 446
source : AC2

9) chain A
residue 91
type
sequence C
description BINDING SITE FOR RESIDUE 2FD A 446
source : AC2

10) chain A
residue 92
type
sequence G
description BINDING SITE FOR RESIDUE 2FD A 446
source : AC2

11) chain A
residue 159
type
sequence F
description BINDING SITE FOR RESIDUE 2FD A 446
source : AC2

12) chain A
residue 178
type
sequence V
description BINDING SITE FOR RESIDUE 2FD A 446
source : AC2

13) chain A
residue 179
type
sequence E
description BINDING SITE FOR RESIDUE 2FD A 446
source : AC2

14) chain A
residue 180
type
sequence M
description BINDING SITE FOR RESIDUE 2FD A 446
source : AC2

15) chain A
residue 181
type
sequence E
description BINDING SITE FOR RESIDUE 2FD A 446
source : AC2

16) chain A
residue 204
type
sequence D
description BINDING SITE FOR RESIDUE 2FD A 446
source : AC2

17) chain B
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE PO4 B 450
source : AC3

18) chain B
residue 87
type
sequence R
description BINDING SITE FOR RESIDUE PO4 B 450
source : AC3

19) chain B
residue 89
type
sequence G
description BINDING SITE FOR RESIDUE PO4 B 450
source : AC3

20) chain B
residue 90
type
sequence S
description BINDING SITE FOR RESIDUE PO4 B 450
source : AC3

21) chain C
residue 43
type
sequence R
description BINDING SITE FOR RESIDUE PO4 B 450
source : AC3

22) chain B
residue 64
type
sequence M
description BINDING SITE FOR RESIDUE 2FD B 447
source : AC4

23) chain B
residue 90
type
sequence S
description BINDING SITE FOR RESIDUE 2FD B 447
source : AC4

24) chain B
residue 91
type
sequence C
description BINDING SITE FOR RESIDUE 2FD B 447
source : AC4

25) chain B
residue 92
type
sequence G
description BINDING SITE FOR RESIDUE 2FD B 447
source : AC4

26) chain B
residue 159
type
sequence F
description BINDING SITE FOR RESIDUE 2FD B 447
source : AC4

27) chain B
residue 178
type
sequence V
description BINDING SITE FOR RESIDUE 2FD B 447
source : AC4

28) chain B
residue 180
type
sequence M
description BINDING SITE FOR RESIDUE 2FD B 447
source : AC4

29) chain B
residue 181
type
sequence E
description BINDING SITE FOR RESIDUE 2FD B 447
source : AC4

30) chain B
residue 204
type
sequence D
description BINDING SITE FOR RESIDUE 2FD B 447
source : AC4

31) chain C
residue 4
type
sequence H
description BINDING SITE FOR RESIDUE 2FD B 447
source : AC4

32) chain C
residue 43
type
sequence R
description BINDING SITE FOR RESIDUE 2FD B 447
source : AC4

33) chain B
residue 43
type
sequence R
description BINDING SITE FOR RESIDUE PO4 C 451
source : AC5

34) chain C
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE PO4 C 451
source : AC5

35) chain C
residue 24
type
sequence R
description BINDING SITE FOR RESIDUE PO4 C 451
source : AC5

36) chain C
residue 87
type
sequence R
description BINDING SITE FOR RESIDUE PO4 C 451
source : AC5

37) chain C
residue 89
type
sequence G
description BINDING SITE FOR RESIDUE PO4 C 451
source : AC5

38) chain C
residue 90
type
sequence S
description BINDING SITE FOR RESIDUE PO4 C 451
source : AC5

39) chain B
residue 4
type
sequence H
description BINDING SITE FOR RESIDUE 2FD C 448
source : AC6

40) chain B
residue 43
type
sequence R
description BINDING SITE FOR RESIDUE 2FD C 448
source : AC6

41) chain C
residue 90
type
sequence S
description BINDING SITE FOR RESIDUE 2FD C 448
source : AC6

42) chain C
residue 91
type
sequence C
description BINDING SITE FOR RESIDUE 2FD C 448
source : AC6

43) chain C
residue 92
type
sequence G
description BINDING SITE FOR RESIDUE 2FD C 448
source : AC6

44) chain C
residue 159
type
sequence F
description BINDING SITE FOR RESIDUE 2FD C 448
source : AC6

45) chain C
residue 178
type
sequence V
description BINDING SITE FOR RESIDUE 2FD C 448
source : AC6

46) chain C
residue 179
type
sequence E
description BINDING SITE FOR RESIDUE 2FD C 448
source : AC6

47) chain C
residue 180
type
sequence M
description BINDING SITE FOR RESIDUE 2FD C 448
source : AC6

48) chain C
residue 181
type
sequence E
description BINDING SITE FOR RESIDUE 2FD C 448
source : AC6

49) chain C
residue 204
type
sequence D
description BINDING SITE FOR RESIDUE 2FD C 448
source : AC6

50) chain A
residue 204
type ACT_SITE
sequence D
description Proton donor => ECO:0000255|HAMAP-Rule:MF_01627
source Swiss-Prot : SWS_FT_FI1

51) chain B
residue 204
type ACT_SITE
sequence D
description Proton donor => ECO:0000255|HAMAP-Rule:MF_01627
source Swiss-Prot : SWS_FT_FI1

52) chain C
residue 204
type ACT_SITE
sequence D
description Proton donor => ECO:0000255|HAMAP-Rule:MF_01627
source Swiss-Prot : SWS_FT_FI1

53) chain A
residue 4
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:12937174
source Swiss-Prot : SWS_FT_FI2

54) chain A
residue 43
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:12937174
source Swiss-Prot : SWS_FT_FI2

55) chain B
residue 4
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:12937174
source Swiss-Prot : SWS_FT_FI2

56) chain B
residue 43
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:12937174
source Swiss-Prot : SWS_FT_FI2

57) chain C
residue 4
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:12937174
source Swiss-Prot : SWS_FT_FI2

58) chain C
residue 43
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:12937174
source Swiss-Prot : SWS_FT_FI2

59) chain A
residue 20
type BINDING
sequence G
description in other chain => ECO:0000269|PubMed:12937174
source Swiss-Prot : SWS_FT_FI3

60) chain A
residue 24
type BINDING
sequence R
description in other chain => ECO:0000269|PubMed:12937174
source Swiss-Prot : SWS_FT_FI3

61) chain A
residue 87
type BINDING
sequence R
description in other chain => ECO:0000269|PubMed:12937174
source Swiss-Prot : SWS_FT_FI3

62) chain B
residue 203
type BINDING
sequence S
description in other chain => ECO:0000269|PubMed:12937174
source Swiss-Prot : SWS_FT_FI3

63) chain C
residue 20
type BINDING
sequence G
description in other chain => ECO:0000269|PubMed:12937174
source Swiss-Prot : SWS_FT_FI3

64) chain C
residue 24
type BINDING
sequence R
description in other chain => ECO:0000269|PubMed:12937174
source Swiss-Prot : SWS_FT_FI3

65) chain C
residue 87
type BINDING
sequence R
description in other chain => ECO:0000269|PubMed:12937174
source Swiss-Prot : SWS_FT_FI3

66) chain C
residue 179
type BINDING
sequence E
description in other chain => ECO:0000269|PubMed:12937174
source Swiss-Prot : SWS_FT_FI3

67) chain C
residue 203
type BINDING
sequence S
description in other chain => ECO:0000269|PubMed:12937174
source Swiss-Prot : SWS_FT_FI3

68) chain A
residue 179
type BINDING
sequence E
description in other chain => ECO:0000269|PubMed:12937174
source Swiss-Prot : SWS_FT_FI3

69) chain A
residue 203
type BINDING
sequence S
description in other chain => ECO:0000269|PubMed:12937174
source Swiss-Prot : SWS_FT_FI3

70) chain B
residue 20
type BINDING
sequence G
description in other chain => ECO:0000269|PubMed:12937174
source Swiss-Prot : SWS_FT_FI3

71) chain B
residue 24
type BINDING
sequence R
description in other chain => ECO:0000269|PubMed:12937174
source Swiss-Prot : SWS_FT_FI3

72) chain B
residue 87
type BINDING
sequence R
description in other chain => ECO:0000269|PubMed:12937174
source Swiss-Prot : SWS_FT_FI3

73) chain B
residue 179
type BINDING
sequence E
description in other chain => ECO:0000269|PubMed:12937174
source Swiss-Prot : SWS_FT_FI3

74) chain A
residue 217
type SITE
sequence R
description Important for catalytic activity => ECO:0000255|HAMAP-Rule:MF_01627
source Swiss-Prot : SWS_FT_FI4

75) chain B
residue 217
type SITE
sequence R
description Important for catalytic activity => ECO:0000255|HAMAP-Rule:MF_01627
source Swiss-Prot : SWS_FT_FI4

76) chain A
residue 26
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000255|HAMAP-Rule:MF_01627
source Swiss-Prot : SWS_FT_FI5

77) chain B
residue 26
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000255|HAMAP-Rule:MF_01627
source Swiss-Prot : SWS_FT_FI5

78) chain C
residue 26
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000255|HAMAP-Rule:MF_01627
source Swiss-Prot : SWS_FT_FI5

79) chain A
residue 61-76
type prosite
sequence GHGMGIPSCSIYTKEL
description PNP_UDP_1 Purine and other phosphorylases family 1 signature. GhGMGiPScSIytkEL
source prosite : PS01232


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