eF-site ID 1oyp-D
PDB Code 1oyp
Chain D

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Title Crystal Structure of the phosphorolytic exoribonuclease RNase PH from Bacillus subtilis
Classification TRANSFERASE
Compound Ribonuclease PH
Source ORGANISM_SCIENTIFIC: Bacillus subtilis;
Sequence D:  MRHDGRQHDELRPITFDLDFISHPEGSVLITAGNTKVICN
ASVEDRVPPFLRGGGKGWITAEYSMLSGRTMEIQRLIGRA
LRAVVDLEKLGERTIWIDCDVIQADGGTRTASITGAFLAM
AIAIGKLIKAGTIKTNPITDFLAAISVGIDKEQGILLDLN
YEEDSSAEVDMNVIMTGSGRFVELQGTGEEATFSREDLNG
LLGLAEKGIQELIDKQKEVLGDSLPE
Description


Functional site

1) chain D
residue 86
type
sequence R
description BINDING SITE FOR RESIDUE SO4 D 307
source : AC7

2) chain D
residue 124
type
sequence G
description BINDING SITE FOR RESIDUE SO4 D 307
source : AC7

3) chain D
residue 125
type
sequence T
description BINDING SITE FOR RESIDUE SO4 D 307
source : AC7

4) chain D
residue 126
type
sequence R
description BINDING SITE FOR RESIDUE SO4 D 307
source : AC7

5) chain D
residue 58
type
sequence W
description BINDING SITE FOR RESIDUE SO4 D 308
source : AC8

6) chain D
residue 60
type
sequence T
description BINDING SITE FOR RESIDUE SO4 D 308
source : AC8

7) chain D
residue 99
type
sequence R
description BINDING SITE FOR RESIDUE SO4 D 308
source : AC8

8) chain D
residue 124
type BINDING
sequence G
description BINDING => ECO:0000255|HAMAP-Rule:MF_00564, ECO:0000305|PubMed:14767080
source Swiss-Prot : SWS_FT_FI2

9) chain D
residue 86
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00564
source Swiss-Prot : SWS_FT_FI1


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