eF-site ID 1oyp-A
PDB Code 1oyp
Chain A

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Title Crystal Structure of the phosphorolytic exoribonuclease RNase PH from Bacillus subtilis
Classification TRANSFERASE
Compound Ribonuclease PH
Source ORGANISM_SCIENTIFIC: Bacillus subtilis;
Sequence A:  MRHDGRQHDELRPITFDLDFISHPEGSVLITAGNTKVICN
ASVEDRVPPFLRGGGKGWITAEYSMLSGRTMEIQRLIGRA
LRAVVDLEKLGERTIWIDCDVIQADGGTRTASITGAFLAM
AIAIGKLIKAGTIKTNPITDFLAAISVGIDKEQGILLDLN
YEEDSSAEVDMNVIMTGSGRFVELQGTGEEATFSREDLNG
LLGLAEKGIQELIDKQKEVLGDSLPE
Description


Functional site

1) chain A
residue 86
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 301
source : AC1

2) chain A
residue 124
type
sequence G
description BINDING SITE FOR RESIDUE SO4 A 301
source : AC1

3) chain A
residue 125
type
sequence T
description BINDING SITE FOR RESIDUE SO4 A 301
source : AC1

4) chain A
residue 126
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 301
source : AC1

5) chain A
residue 58
type
sequence W
description BINDING SITE FOR RESIDUE SO4 A 302
source : AC2

6) chain A
residue 60
type
sequence T
description BINDING SITE FOR RESIDUE SO4 A 302
source : AC2

7) chain A
residue 99
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 302
source : AC2

8) chain A
residue 124
type BINDING
sequence G
description BINDING => ECO:0000255|HAMAP-Rule:MF_00564, ECO:0000305|PubMed:14767080
source Swiss-Prot : SWS_FT_FI2

9) chain A
residue 86
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00564
source Swiss-Prot : SWS_FT_FI1

10) chain A
residue 116-128
type prosite
sequence CDVIQADGGTRTA
description RIBONUCLEASE_PH Ribonuclease PH signature. CDVIQADGGtr.TA
source prosite : PS01277


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