eF-site ID 1ohf-ABCD PDB Code 1ohf Chain A, B, C, D click to enlarge Title The refined structure of Nudaurelia capensis omega virus Classification VIRUS Compound NUDAURELIA CAPENSIS OMEGA VIRUS CAPSID PROTEIN Source ORGANISM_SCIENTIFIC: NUDAURELIA CAPENSIS OMEGA VIRUS; Sequence A:  VITFPTNVATMPEFRSWARGKLDIDQDSIGWYFKYLDPAG ATESARAVGEYSKIPDGLVKFSVDAEIREIYNEECPTVSD ASIPLDGAQWSLSIISYPMFRTAYFAVANVDNKEISLDVT NDLIVWLNNLASWRDVVDSGQWFTFSDDPTWFVRIRVLHP TYDLPDPTEGLLRTVSDYRLTYKSITCEANMPTLVDQGFW IGGHYALTPIATTQNAVEGSGFVHPFNVTRPGIAAGVTLT WASMPPGGSAPSGDPAWIPDSTTQFQWRHGGFDAPTGVIT YTIPRGYTMQYFDTTTNEWNGFANPDDVVTFGQTGGAAGT NATITITAPTVTLTILATTTSAANVINFRNLDAETTAASN RSEVPLPPLTFGQTAPNNPKIEQTLVKDTLGSYLVHSKMR NPVFQLTPASSFGAISFTNPGFDRNLDLPGFGGIRDSLDV NMSTAVCHFRSLSKSCSIVTKTYQGWEGVTNVNTPFGQFA HSGLLKNDEILCLADDLATRLTGVYGATDNFAAAVLAFAA NMLTSVLKSEATTSVIKEL B:  DNVTAAAQELGQSLDANVITFPTNVATMPEFRSWARGKLD IDQDSIGWYFKYLDPAGATESARAVGEYSKIPDGLVKFSV DAEIREIYNEECPTVSDASIPLDGAQWSLSIISYPMFRTA YFAVANVDNKEISLDVTNDLIVWLNNLASWRDVVDSGQWF TFSDDPTWFVRIRVLHPTYDLPDPTEGLLRTVSDYRLTYK SITCEANMPTLVDQGFWIGGHYALTPIATTQNAVEGSGFV HPFNVTRPGIAAGVTLTWASMPPGGSAPSGDPAWIPDSTT QFQWRHGGFDAPTGVITYTIPRGYTMQYFDTTTNEWNGFA NPDDVVTFGQTGGAAGTNATITITAPTVTLTILATTTSAA NVINFRNLDAETTAASNRSEVPLPPLTFGQTAPNNPKIEQ TLVKDTLGSYLVHSKMRNPVFQLTPASSFGAISFTNPGFD RNLDLPGFGGIRDSLDVNMSTAVCHFRSLSKSCSIVTKTY QGWEGVTNVNTPFGQFAHSGLLKNDEILCLADDLATRLTG VYGATDNFAAAVLAFAANMLTSVLKSE C:  NIDNVTAAAQELGQSLDANVITFPTNVATMPEFRSWARGK LDIDQDSIGWYFKYLDPAGATESARAVGEYSKIPDGLVKF SVDAEIREIYNEECPTVSDLDGAQWSLSIISYPMFRTAYF AVANVDNKEISLDVTNDLIVWLNNLASWRDVVDSGQWFTF SDDPTWFVRIRVLHPTYDLPDPTEGLLRTVSDYRLTYKSI TCEANMPTLVDQGFWIGGHYALTPIATTQNAVEGSGFVHP FNVTRPGIAAGVTLTWASMPPGGSAPSGDPAWIPDSTTQF QWRHGGFDAPTGVITYTIPRGYTMQYFDTTTNEWNGFANP DDVVTFGQTGGAAGTNATITITAPTVTLTILATTTSAANV INFRNLDAETTAASNRSEVPLPPLTFGQTAPNNPKIEQTL VKDTLGSYLVHSKMRNPVFQLTPASSFGAISFTNPGFDRN LDLPGFGGIRDSLDVNMSTAVCHFRSLSKSCSIVTKTYQG WEGVTNVNTPFGQFAHSGLLKNDEILCLADDLATRLTGVY GATDNFAAAVLAFAANMLTSVLKSETSVIKELGNLANQGL ARLPGLLASIPGKIAARVRARRDRRRAARM D:  IDNVTAAAQELGQSLDANVITFPTNVATMPEFRSWARGKL DIDQDSIGWYFKYLDPAGATESARAVGEYSKIPDGLVKFS VDAEIREIYNEECPTVSDASIPLDGAQWSLSIISYPMFRT AYFAVANVDNKEISLDVTNDLIVWLNNLASWRDVVDSGQW FTFSDDPTWFVRIRVLHPTYDLPDPTEGLLRTVSDYRLTY KSITCEANMPTLVDQGFWIGGHYALTPIATTQNAVEGSGF VHPFNVTRPGIAAGVTLTWASMPPGGSAPSGDPAWIPDST TQFQWRHGGFDAPTGVITYTIPRGYTMQYFDTTTNEWNGF ANPDDVVTFGQTGGAAGTNATITITAPTVTLTILATTTSA ANVINFRNLDAETTAASNRSEVPLPPLTFGQTAPNNPKIE QTLVKDTLGSYLVHSKMRNPVFQLTPASSFGAISFTNPGF DRNLDLPGFGGIRDSLDVNMSTAVCHFRSLSKSCSIVTKT YQGWEGVTNVNTPFGQFAHSGLLKNDEILCLADDLATRLT GVYGATDNFAAAVLAFAANMLTSVLKSEATTSVIKELGNL PGLLASIPGKIAARVRARRDRRRAARM Description (1)  NUDAURELIA CAPENSIS OMEGA VIRUS CAPSID PROTEIN Functional site 1) chain A residue 182 type sequence D description BINDING SITE FOR RESIDUE MG A1645 source : AC1 2) chain A residue 207 type sequence D description BINDING SITE FOR RESIDUE MG A1645 source : AC1 3) chain B residue 182 type sequence D description BINDING SITE FOR RESIDUE MG B1645 source : AC2 4) chain B residue 207 type sequence D description BINDING SITE FOR RESIDUE MG B1645 source : AC2 5) chain D residue 330 type sequence G description BINDING SITE FOR RESIDUE MG B1645 source : AC2 6) chain C residue 182 type sequence D description BINDING SITE FOR RESIDUE MG C1645 source : AC3 7) chain C residue 207 type sequence D description BINDING SITE FOR RESIDUE MG C1645 source : AC3 8) chain D residue 182 type sequence D description BINDING SITE FOR RESIDUE MG D1645 source : AC4 9) chain D residue 207 type sequence D description BINDING SITE FOR RESIDUE MG D1645 source : AC4

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