eF-site ID 1nnj-ADE PDB Code 1nnj Chain A, D, E click to enlarge Title Crystal structure Complex between the Lactococcus lactis Fpg and an abasic site containing DNA Classification HYDROLASE Compound 5'-D(*CP*TP*CP*TP*TP*TP*(PDI)P*TP*TP*TP*CP*TP*CP*G)-3' Source Lactococcus lactis subsp. cremoris (Streptococcus cremoris) (1NNJ) Sequence A:  GELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQL KKELTGKTIQGISRRGKYLIFEIGDDFRLISHLRMEGKYR LATLDAPREKHDHLTMKFADGQLIYADVRKFGTWELISTD QVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYL LEQTLVAGLGNIYVDEVLWLAKIHPEKETNQLIESSIHLL HDSIIEILQKAIKLGGSSIALGSTGKMQNELQVYGKTGEK CSRCGAEIQKIKVAGRGTHFCPVCQQK D:  CTCTTTXTTTCTCG E:  GCGAGAAACAAAGA Description Functional site 1) chain A residue 245 type sequence C description BINDING SITE FOR RESIDUE ZN A 300 source : AC1 2) chain A residue 248 type sequence C description BINDING SITE FOR RESIDUE ZN A 300 source : AC1 3) chain A residue 265 type sequence C description BINDING SITE FOR RESIDUE ZN A 300 source : AC1 4) chain A residue 268 type sequence C description BINDING SITE FOR RESIDUE ZN A 300 source : AC1 5) chain A residue 58 type sequence Y description BINDING SITE FOR RESIDUE GOL A 301 source : AC2 6) chain A residue 72 type sequence H description BINDING SITE FOR RESIDUE GOL A 301 source : AC2 7) chain A residue 74 type sequence R description BINDING SITE FOR RESIDUE GOL A 301 source : AC2 8) chain A residue 113 type sequence T description BINDING SITE FOR RESIDUE GOL A 301 source : AC2 9) chain A residue 115 type sequence E description BINDING SITE FOR RESIDUE GOL A 301 source : AC2 10) chain A residue 125 type sequence Y description BINDING SITE FOR RESIDUE GOL A 301 source : AC2 11) chain A residue 129 type sequence K description BINDING SITE FOR RESIDUE GOL A 301 source : AC2 12) chain D residue 9 type sequence T description BINDING SITE FOR RESIDUE GOL A 301 source : AC2 13) chain D residue 10 type sequence T description BINDING SITE FOR RESIDUE GOL A 301 source : AC2 14) chain A residue 259 type sequence G description BINDING SITE FOR RESIDUE GOL D 302 source : AC3 15) chain D residue 6 type sequence T description BINDING SITE FOR RESIDUE GOL D 302 source : AC3 16) chain D residue 8 type sequence T description BINDING SITE FOR RESIDUE GOL D 302 source : AC3 17) chain D residue 9 type sequence T description BINDING SITE FOR RESIDUE GOL D 302 source : AC3 18) chain E residue 21 type sequence A description BINDING SITE FOR RESIDUE GOL D 302 source : AC3 19) chain A residue 245-269 type prosite sequence CSRCGAEIQKIKVAGRGTHFCPVCQ description ZF_FPG_1 Zinc finger FPG-type signature. Csr..CGaeIqkikvag....RGthFCpvCQ source prosite : PS01242 20) chain A residue 237-271 type ZN_FING sequence VYGKTGEKCSRCGAEIQKIKVAGRGTHFCPVCQQK description FPG-type source Swiss-Prot : SWS_FT_FI1 21) chain A residue 1 type ACT_SITE sequence G description Schiff-base intermediate with DNA => ECO:0000305 source Swiss-Prot : SWS_FT_FI2 22) chain A residue 2 type ACT_SITE sequence E description Proton donor => ECO:0000305 source Swiss-Prot : SWS_FT_FI3 23) chain A residue 57 type ACT_SITE sequence K description Proton donor; for beta-elimination activity => ECO:0000305 source Swiss-Prot : SWS_FT_FI4 24) chain A residue 261 type ACT_SITE sequence G description Proton donor; for delta-elimination activity => ECO:0000305 source Swiss-Prot : SWS_FT_FI5 25) chain A residue 91 type BINDING sequence H description source Swiss-Prot : SWS_FT_FI6 26) chain A residue 109 type BINDING sequence R description source Swiss-Prot : SWS_FT_FI6

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