eF-site ID 1nmc-ABC
PDB Code 1nmc
Chain A, B, C

click to enlarge
Title COMPLEX BETWEEN NC10 ANTI-INFLUENZA VIRUS NEURAMINIDASE SINGLE CHAIN ANTIBODY WITH A 15 RESIDUE LINKER AND INFLUENZA VIRUS NEURAMINIDASE
Classification COMPLEX (SINGLE-CHAIN ANTIBODY/ANTIGEN)
Compound NEURAMINIDASE
Source (AAA19165)
Sequence A:  RDFNNLTKGLCTINSWHIYGKDNAVRIGEDSDVLVTREPY
VSCDPDECRFYALSQGTTIRGKHSNGTIHDRSQYRALISW
PLSSPPTVYNSRVECIGWSSTSCHDGKTRMSICISGPNNN
ASAVIWYNRRPVTEINTWARNILRTQESECVCHNGVCPVV
FTDGSATGPAETRIYYFKEGKILKWEPLAGTAKHIEECSC
YGERAEITCTCRDNWQGSNRPVIRIDPVAMTHTSQYICSP
VLTDNPRPNDPTVGKCNDPYPGNNNNGVKGFSYLDGVNTW
LGRTISIASRSGYEMLKVPNALTDDKSKPTQGQTIVLNTD
WSGYSGSFMDYWAEGECYRACFYVELIRGRPKEDKVWWTS
NSIVSMCSSTEFLGQWDWPDGAKIEYFL
B:  QVQLQQSGAELVKPGASVRMSCKASGYTFTNYNMYWVKQS
PGQGLEWIGIFYPGNGDTSYNQKFKDKATLTADKSSNTAY
MQLSSLTSEDSAVYYCARSGGSYRYDGGFDYWGQGTTVTV
SS
C:  DIELTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQNP
DGTVKLLIYYTSNLHSEVPSRFSGSGSGTDYSLTISNLEQ
EDIATYFCQQDFTLPFTFGGGTKLEIRDY
Description


Functional site

1) chain A
residue 151
type catalytic
sequence D
description 828
source MCSA : MCSA2

2) chain A
residue 277
type catalytic
sequence E
description 828
source MCSA : MCSA2

3) chain A
residue 292
type catalytic
sequence R
description 828
source MCSA : MCSA2

4) chain A
residue 371
type catalytic
sequence R
description 828
source MCSA : MCSA2

5) chain A
residue 406
type catalytic
sequence Y
description 828
source MCSA : MCSA2

6) chain A
residue 151
type ACT_SITE
sequence D
description Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_04071
source Swiss-Prot : SWS_FT_FI1

7) chain A
residue 406
type ACT_SITE
sequence Y
description Nucleophile => ECO:0000255|HAMAP-Rule:MF_04071
source Swiss-Prot : SWS_FT_FI2

8) chain A
residue 371
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_04071
source Swiss-Prot : SWS_FT_FI3

9) chain A
residue 118
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_04071
source Swiss-Prot : SWS_FT_FI3

10) chain A
residue 152
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_04071
source Swiss-Prot : SWS_FT_FI3

11) chain A
residue 276
type BINDING
sequence E
description BINDING => ECO:0000255|HAMAP-Rule:MF_04071
source Swiss-Prot : SWS_FT_FI3

12) chain A
residue 292
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_04071
source Swiss-Prot : SWS_FT_FI3

13) chain A
residue 293
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_04071, ECO:0000269|PubMed:23429702, ECO:0000269|PubMed:7549872, ECO:0000269|PubMed:8371267, ECO:0000269|PubMed:9342319
source Swiss-Prot : SWS_FT_FI4

14) chain A
residue 297
type BINDING
sequence G
description BINDING => ECO:0000255|HAMAP-Rule:MF_04071, ECO:0000269|PubMed:23429702, ECO:0000269|PubMed:7549872, ECO:0000269|PubMed:8371267, ECO:0000269|PubMed:9342319
source Swiss-Prot : SWS_FT_FI4

15) chain A
residue 324
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_04071, ECO:0000269|PubMed:23429702, ECO:0000269|PubMed:7549872, ECO:0000269|PubMed:8371267, ECO:0000269|PubMed:9342319
source Swiss-Prot : SWS_FT_FI4

16) chain A
residue 347
type BINDING
sequence N
description BINDING => ECO:0000255|HAMAP-Rule:MF_04071, ECO:0000269|PubMed:23429702, ECO:0000269|PubMed:7549872, ECO:0000269|PubMed:8371267, ECO:0000269|PubMed:9342319
source Swiss-Prot : SWS_FT_FI4

17) chain A
residue 86
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04071, ECO:0000269|PubMed:23429702, ECO:0000269|PubMed:7549872, ECO:0000269|PubMed:9342319
source Swiss-Prot : SWS_FT_FI5

18) chain A
residue 146
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04071, ECO:0000269|PubMed:23429702, ECO:0000269|PubMed:7549872, ECO:0000269|PubMed:9342319
source Swiss-Prot : SWS_FT_FI5

19) chain A
residue 200
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04071, ECO:0000269|PubMed:23429702, ECO:0000269|PubMed:7549872, ECO:0000269|PubMed:9342319
source Swiss-Prot : SWS_FT_FI5


Display surface

Download
Links