eF-site ID 1nd3-ABCD PDB Code 1nd3 Chain A, B, C, D click to enlarge Title The structure of HRV16, when complexed with pleconaril, an antiviral compound Classification VIRUS Compound coat protein VP1 Source ORGANISM_SCIENTIFIC: Human rhinovirus 16; Sequence A:  NPVERYVDEVLNEVLVVPNINQSHPTTSNAAPVLDAAETG HTNKIQPEDTIETRYVQSSQTLDEMSVESFLGRSGCIHES VLDIVDNYNDQSFTKWNINLQEMAQIRRKFEMFTYARFDS EITMVPSVAAKDGHIGHIVMQYMYVPPGAPIPTTRDDYAW QSGTNASVFWQHGQPFPRFSLPFLSIASAYYMFYDGYDGD TYKSRYGTVVTNDMGTLCSRIVTSEQLHKVKVVTRIYHKA KHTKAWCPRPPRAVQYSHTHTTNYKLSSEVHNDVAIRPRT NLTTV B:  SDRIIQITRGDSTITSQDVANAVVGYGVWPHYLTPQDATA IDKPTQPDTSSNRFYTLDSKMWNSTSKGWWWKLPDALKDM GIFGENMFYHFLGRSGYTVHVQCNASKFHQGTLLVVMIPE HQLATVNKGNVNAGYKYTHPGEAGREVGTQVENEKQPSDD NWLNFDGTLLGNLLIFPHQFINLRSNNSATLIVPYVNAVP MDSMVRHNNWSLVIIPVCQLQSNNISNIVPITVSISPMCA EFSGARAKTVVQ C:  GLPVYVTPGSGQFMTTDDMQSPCALPWYHPTKEIFIPGEV KNLIEMCQVDTLIPINSTQSNIGNVSMYTVTLSPQTKLAE EIFAIKVDIASHPLATTLIGEIASYFTHWTGSLRFSFMFC GTANTTLKVLLAYTPPGIGKPRSRKEAMLGTHVVWDVGLQ STVSLVVPWISASQYRFTTPDTYSSAGYITCWYQTNFVVP PNTPNTAEMLCFVSGCKDFCLRMARDTDLHKQTGPITQ D:  GAQVSRQSINYFNINYFKDAASSGASRLD Description Functional site 1) chain A residue 134 type sequence H description BINDING SITE FOR RESIDUE ZN A 6000 source : AC1 2) chain A residue 98 type sequence I description BINDING SITE FOR RESIDUE W11 A 7001 source : AC2 3) chain A residue 122 type sequence I description BINDING SITE FOR RESIDUE W11 A 7001 source : AC2 4) chain A residue 142 type sequence Y description BINDING SITE FOR RESIDUE W11 A 7001 source : AC2 5) chain A residue 143 type sequence M description BINDING SITE FOR RESIDUE W11 A 7001 source : AC2 6) chain A residue 144 type sequence Y description BINDING SITE FOR RESIDUE W11 A 7001 source : AC2 7) chain A residue 166 type sequence A description BINDING SITE FOR RESIDUE W11 A 7001 source : AC2 8) chain A residue 168 type sequence V description BINDING SITE FOR RESIDUE W11 A 7001 source : AC2 9) chain A residue 179 type sequence F description BINDING SITE FOR RESIDUE W11 A 7001 source : AC2 10) chain A residue 181 type sequence L description BINDING SITE FOR RESIDUE W11 A 7001 source : AC2 11) chain A residue 184 type sequence L description BINDING SITE FOR RESIDUE W11 A 7001 source : AC2 12) chain A residue 190 type sequence Y description BINDING SITE FOR RESIDUE W11 A 7001 source : AC2 13) chain A residue 212 type sequence N description BINDING SITE FOR RESIDUE W11 A 7001 source : AC2 14) chain A residue 214 type sequence M description BINDING SITE FOR RESIDUE W11 A 7001 source : AC2 15) chain A residue 217 type sequence L description BINDING SITE FOR RESIDUE W11 A 7001 source : AC2 16) chain D residue 1 type LIPID sequence G description N-myristoyl glycine; by host => ECO:0000250|UniProtKB:P03300 source Swiss-Prot : SWS_FT_FI2

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