eF-site ID 1ncp-C
PDB Code 1ncp
Chain C

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Title STRUCTURAL CHARACTERIZATION OF A 39 RESIDUE SYNTHETIC PEPTIDE CONTAINING THE TWO ZINC BINDING DOMAINS FROM THE HIV-1 P7 NUCLEOCAPSID PROTEIN BY CD AND NMR SPECTROSCOPY
Classification VIRAL PROTEIN
Compound HIV-1 P7 NUCLEOCAPSID PROTEIN
Source (POL_HV1U4)
Sequence C:  KGCWKCGKEGHQMKDCTE
Description (1)  HIV-1 P7 NUCLEOCAPSID PROTEIN (TWO ZINC BINDING DOMAINS) (NMR, MINIMIZED AVERAGE STRUCTURE)


Functional site

1) chain C
residue 24
type
sequence C
description BINDING SITE FOR RESIDUE ZN N 60
source : AC1

2) chain C
residue 27
type
sequence C
description BINDING SITE FOR RESIDUE ZN N 60
source : AC1

3) chain C
residue 32
type
sequence H
description BINDING SITE FOR RESIDUE ZN N 60
source : AC1

4) chain C
residue 37
type
sequence C
description BINDING SITE FOR RESIDUE ZN N 60
source : AC1

5) chain C
residue 24
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 61
source : AC2

6) chain C
residue 27
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 61
source : AC2

7) chain C
residue 32
type
sequence H
description BINDING SITE FOR RESIDUE ZN C 61
source : AC2

8) chain C
residue 37
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 61
source : AC2

9) chain C
residue 38
type SITE
sequence T
description Cleavage; by viral protease => ECO:0000255
source Swiss-Prot : SWS_FT_FI1


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