|
eF-site ID
|
1nb5-ABCDIJKLPRST |
PDB Code
|
1nb5 |
Chain
|
A, B, C, D, I, J, K, L, P, R, S, T |
|
click to enlarge
|
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Title
|
Crystal structure of stefin A in complex with cathepsin H |
Classification
|
HYDROLASE/HYDROLASE INHIBITOR |
Compound
|
Cathepsin H |
Source
|
ORGANISM_COMMON: pig; ORGANISM_SCIENTIFIC: Sus scrofa; |
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Sequence
|
A: |
YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVA
IATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY
NKGIMGEDTYPYKGQDDHCKFQPDKAIAFVKDVANITMND
EEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHKT
PDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLI
ERGKNMCGLAACASYPIPLV
|
B: |
YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVA
IATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY
NKGIMGEDTYPYKGQDDHCKFQPDKAIAFVKDVANITMND
EEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHKT
PDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLI
ERGKNMCGLAACASYPIPLV
|
C: |
YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVA
IATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY
NKGIMGEDTYPYKGQDDHCKFQPDKAIAFVKDVANITMND
EEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHKT
PDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLI
ERGKNMCGLAACASYPIPLV
|
D: |
YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVA
IATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY
NKGIMGEDTYPYKGQDDHCKFQPDKAIAFVKDVANITMND
EEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHKT
PDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLI
ERGKNMCGLAACASYPIPLV
|
I: |
MIPGGLSEAKPATPEIQEIVDKVKPQLEEKTNETYGKLEA
VQYKTQVVAGTNYYIKVRAGDNKYMHLKVFKSLPGQNEDL
VLTGYQVDKNKDDELTGF
|
J: |
MIPGGLSEAKPATPEIQEIVDKVKPQLEEKTNETYGKLEA
VQYKTQVVAGTNYYIKVRAGDNKYMHLKVFKSLPGQNEDL
VLTGYQVDKNKDDELTGF
|
K: |
MIPGGLSEAKPATPEIQEIVDKVKPQLEEKTNETYGKLEA
VQYKTQVVAGTNYYIKVRAGDNKYMHLKVFKSLPGQNEDL
VLTGYQVDKNKDDELTGF
|
L: |
MIPGGLSEAKPATPEIQEIVDKVKPQLEEKTNETYGKLEA
VQYKTQVVAGTNYYIKVRAGDNKYMHLKVFKSLPGQNEDL
VLTGYQVDKNKDDELTGF
|
P: |
EPQNCSAT
|
R: |
EPQNCSAT
|
S: |
EPQNCSAT
|
T: |
EPQNCSAT
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
A |
residue |
19 |
type |
catalytic |
sequence |
Q
|
description |
682
|
source |
MCSA : MCSA1
|
|
2)
|
chain |
A |
residue |
25 |
type |
catalytic |
sequence |
C
|
description |
682
|
source |
MCSA : MCSA1
|
|
3)
|
chain |
A |
residue |
159 |
type |
catalytic |
sequence |
H
|
description |
682
|
source |
MCSA : MCSA1
|
|
4)
|
chain |
B |
residue |
19 |
type |
catalytic |
sequence |
Q
|
description |
682
|
source |
MCSA : MCSA2
|
|
5)
|
chain |
B |
residue |
25 |
type |
catalytic |
sequence |
C
|
description |
682
|
source |
MCSA : MCSA2
|
|
6)
|
chain |
B |
residue |
159 |
type |
catalytic |
sequence |
H
|
description |
682
|
source |
MCSA : MCSA2
|
|
7)
|
chain |
C |
residue |
19 |
type |
catalytic |
sequence |
Q
|
description |
682
|
source |
MCSA : MCSA3
|
|
8)
|
chain |
C |
residue |
25 |
type |
catalytic |
sequence |
C
|
description |
682
|
source |
MCSA : MCSA3
|
|
9)
|
chain |
C |
residue |
159 |
type |
catalytic |
sequence |
H
|
description |
682
|
source |
MCSA : MCSA3
|
|
10)
|
chain |
D |
residue |
19 |
type |
catalytic |
sequence |
Q
|
description |
682
|
source |
MCSA : MCSA4
|
|
11)
|
chain |
D |
residue |
25 |
type |
catalytic |
sequence |
C
|
description |
682
|
source |
MCSA : MCSA4
|
|
12)
|
chain |
D |
residue |
159 |
type |
catalytic |
sequence |
H
|
description |
682
|
source |
MCSA : MCSA4
|
|
13)
|
chain |
I |
residue |
9 |
type |
SITE |
sequence |
G
|
description |
Reactive site
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
14)
|
chain |
D |
residue |
25 |
type |
SITE |
sequence |
C
|
description |
Reactive site
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
15)
|
chain |
D |
residue |
159 |
type |
SITE |
sequence |
H
|
description |
Reactive site
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
16)
|
chain |
D |
residue |
175 |
type |
SITE |
sequence |
N
|
description |
Reactive site
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
17)
|
chain |
J |
residue |
9 |
type |
SITE |
sequence |
G
|
description |
Reactive site
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
18)
|
chain |
K |
residue |
9 |
type |
SITE |
sequence |
G
|
description |
Reactive site
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
19)
|
chain |
L |
residue |
9 |
type |
SITE |
sequence |
G
|
description |
Reactive site
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
20)
|
chain |
B |
residue |
159 |
type |
SITE |
sequence |
H
|
description |
Reactive site
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
21)
|
chain |
B |
residue |
175 |
type |
SITE |
sequence |
N
|
description |
Reactive site
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
22)
|
chain |
C |
residue |
25 |
type |
SITE |
sequence |
C
|
description |
Reactive site
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
23)
|
chain |
C |
residue |
159 |
type |
SITE |
sequence |
H
|
description |
Reactive site
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
24)
|
chain |
C |
residue |
175 |
type |
SITE |
sequence |
N
|
description |
Reactive site
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
25)
|
chain |
I |
residue |
6 |
type |
MOD_RES |
sequence |
M
|
description |
N-acetylmethionine => ECO:0000250|UniProtKB:P01039
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
26)
|
chain |
J |
residue |
6 |
type |
MOD_RES |
sequence |
M
|
description |
N-acetylmethionine => ECO:0000250|UniProtKB:P01039
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
27)
|
chain |
K |
residue |
6 |
type |
MOD_RES |
sequence |
M
|
description |
N-acetylmethionine => ECO:0000250|UniProtKB:P01039
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
28)
|
chain |
L |
residue |
6 |
type |
MOD_RES |
sequence |
M
|
description |
N-acetylmethionine => ECO:0000250|UniProtKB:P01039
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
29)
|
chain |
A |
residue |
19-30 |
type |
prosite |
sequence |
QGSCGSCWTFST
|
description |
THIOL_PROTEASE_CYS Eukaryotic thiol (cysteine) proteases cysteine active site. QGsCGSCWTfST
|
source |
prosite : PS00139
|
|
30)
|
chain |
A |
residue |
157-167 |
type |
prosite |
sequence |
VNHAVLAVGYG
|
description |
THIOL_PROTEASE_HIS Eukaryotic thiol (cysteine) proteases histidine active site. VNHAVLAVGYG
|
source |
prosite : PS00639
|
|
31)
|
chain |
A |
residue |
170-189 |
type |
prosite |
sequence |
YWIVKNSWGPQWGMNGYFLI
|
description |
THIOL_PROTEASE_ASN Eukaryotic thiol (cysteine) proteases asparagine active site. YWIvKNSWgpqWGmnGYFlI
|
source |
prosite : PS00640
|
|
32)
|
chain |
I |
residue |
52-65 |
type |
prosite |
sequence |
TQVVAGTNYYIKVR
|
description |
CYSTATIN Cysteine proteases inhibitors signature. TQVVAGTNYyIKVR
|
source |
prosite : PS00287
|
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|
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