eF-site ID 1n36-D
PDB Code 1n36
Chain D

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Title Structure of the Thermus thermophilus 30S ribosomal subunit in the presence of crystallographically disordered codon and near-cognate transfer RNA anticodon stem-loop mismatched at the second codon position
Classification RIBOSOME
Compound 16S RIBOSOMAL RNA
Source ORGANISM_SCIENTIFIC: Thermus thermophilus;
Sequence D:  GRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPG
QHGQKRARRPSDYAVRLREKQKLRRIYGISERQFRNLFEE
ASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQLV
RHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQN
LEAMKGRKVGPWLSLDVEGMKGKFLRLPDREDLALPVNEQ
LVIEFYSR
Description


Functional site

1) chain D
residue 9
type
sequence C
description BINDING SITE FOR RESIDUE ZN D 306
source : AC1

2) chain D
residue 19
type
sequence L
description BINDING SITE FOR RESIDUE ZN D 306
source : AC1

3) chain D
residue 22
type
sequence K
description BINDING SITE FOR RESIDUE ZN D 306
source : AC1

4) chain D
residue 26
type
sequence C
description BINDING SITE FOR RESIDUE ZN D 306
source : AC1

5) chain D
residue 31
type
sequence C
description BINDING SITE FOR RESIDUE ZN D 306
source : AC1

6) chain D
residue 97-121
type prosite
sequence LESRLDNVVYRLGFAVSRRQARQLV
description RIBOSOMAL_S4 Ribosomal protein S4 signature. LEsRLdnvVYRlgfAvSrrqARqLV
source prosite : PS00632


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