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eF-site ID
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1n32-M |
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PDB Code
|
1n32 |
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Chain
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M |
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click to enlarge
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Title
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Structure of the Thermus thermophilus 30S ribosomal subunit bound to codon and near-cognate transfer RNA anticodon stem-loop mismatched at the first codon position at the a site with paromomycin |
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Classification
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RIBOSOME |
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Compound
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16S RIBOSOMAL RNA |
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Source
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ORGANISM_SCIENTIFIC: Thermus thermophilus; |
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Sequence
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M: |
ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINP
ATRVKDLTEAEVVRLREYVENTWKLEGELRAEVAANIKRL
MDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAG
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Description
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(1) |
30S Ribosomal Subunit
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Functional site
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|
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1)
|
chain |
M |
| residue |
20 |
| type |
|
| sequence |
T
|
| description |
BINDING SITE FOR RESIDUE MG M 475
|
| source |
: NC3
|
|
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2)
|
chain |
M |
| residue |
22 |
| type |
|
| sequence |
I
|
| description |
BINDING SITE FOR RESIDUE MG M 475
|
| source |
: NC3
|
|
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3)
|
chain |
M |
| residue |
23 |
| type |
|
| sequence |
Y
|
| description |
BINDING SITE FOR RESIDUE MG M 475
|
| source |
: NC3
|
|
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4)
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chain |
M |
| residue |
25 |
| type |
|
| sequence |
I
|
| description |
BINDING SITE FOR RESIDUE MG M 475
|
| source |
: NC3
|
|
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5)
|
chain |
M |
| residue |
88-101 |
| type |
prosite |
| sequence |
RGLRHRRGLPVRGQ
|
| description |
RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHrrGlpVRGQ
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| source |
prosite : PS00646
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