|
|
eF-site ID
|
1n32-L |
|
PDB Code
|
1n32 |
|
Chain
|
L |
|
click to enlarge
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Title
|
Structure of the Thermus thermophilus 30S ribosomal subunit bound to codon and near-cognate transfer RNA anticodon stem-loop mismatched at the first codon position at the a site with paromomycin |
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Classification
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RIBOSOME |
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Compound
|
16S RIBOSOMAL RNA |
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Source
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ORGANISM_SCIENTIFIC: Thermus thermophilus; |
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Sequence
|
L: |
PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVT
PKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVL
IRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKK
PKEA
|
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Description
|
(1) |
30S Ribosomal Subunit
|
|
Functional site
|
|
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1)
|
chain |
L |
| residue |
48 |
| type |
|
| sequence |
P
|
| description |
BINDING SITE FOR RESIDUE MG A 1605
|
| source |
: GC5
|
|
|
2)
|
chain |
L |
| residue |
49 |
| type |
|
| sequence |
N
|
| description |
BINDING SITE FOR RESIDUE MG A 1605
|
| source |
: GC5
|
|
|
3)
|
chain |
L |
| residue |
48 |
| type |
|
| sequence |
P
|
| description |
BINDING SITE FOR RESIDUE MG A 1614
|
| source |
: HC2
|
|
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4)
|
chain |
L |
| residue |
46-53 |
| type |
prosite |
| sequence |
KKPNSALR
|
| description |
RIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR
|
| source |
prosite : PS00055
|
|
|
5)
|
chain |
L |
| residue |
89 |
| type |
MOD_RES |
| sequence |
R
|
| description |
3-methylthioaspartic acid => ECO:0000269|PubMed:16287167
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
6)
|
chain |
L |
| residue |
92 |
| type |
MOD_RES |
| sequence |
D
|
| description |
3-methylthioaspartic acid => ECO:0000269|PubMed:16287167, ECO:0000269|PubMed:25775268
|
| source |
Swiss-Prot : SWS_FT_FI2
|
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