eF-site ID 1n32-E
PDB Code 1n32
Chain E

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Title Structure of the Thermus thermophilus 30S ribosomal subunit bound to codon and near-cognate transfer RNA anticodon stem-loop mismatched at the first codon position at the a site with paromomycin
Classification RIBOSOME
Compound 16S RIBOSOMAL RNA
Source ORGANISM_SCIENTIFIC: Thermus thermophilus;
Sequence E:  DFEEKMILIRRTARMQAGGRRFRFGALVVVGDRQGRVGLG
FGKAPEVPLAVQKAGYYARRNMVEVPLQNGTIPHEIEVEF
GASKIVLKPAAPGTGVIAGAVPRAILELAGVTDILTKELG
SRNPINIAYATMEALRQLRTKADVERLRKG
Description (1)  30S Ribosomal Subunit


Functional site

1) chain E
residue 103
type
sequence G
description BINDING SITE FOR RESIDUE MG E 468
source : MC6

2) chain E
residue 104
type
sequence A
description BINDING SITE FOR RESIDUE MG E 468
source : MC6

3) chain E
residue 105
type
sequence V
description BINDING SITE FOR RESIDUE MG E 468
source : MC6

4) chain E
residue 106
type
sequence P
description BINDING SITE FOR RESIDUE MG E 468
source : MC6

5) chain E
residue 122
type
sequence E
description BINDING SITE FOR RESIDUE MG E 468
source : MC6

6) chain E
residue 23-55
type prosite
sequence GRRFRFGALVVVGDRQGRVGLGFGKAPEVPLAV
description RIBOSOMAL_S5 Ribosomal protein S5 signature. GRrfrFgAlvVVGDrq.GrVGlGfgkap.EVpl.AV
source prosite : PS00585


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