eF-site ID 1mms-ABCD
PDB Code 1mms
Chain A, B, C, D

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Title Crystal structure of the ribosomal PROTEIN L11-RNA complex
Classification RIBOSOME
Compound 23S RIBOSOMAL RNA
Source (1MMS)
Sequence A:  QIKLQLPAGKATPAPPVGPALGQHGVNIMEFCKRFNAETA
DKAGMILPVVITVYEDKSFTFIIKTPPASFLLKKAAGIEK
GSSEPKRKIVGKVTRKQIEEIAKTKMPDLNANSLEAAMKI
IEGTAKSMGIEVV
B:  KTPPASFLLKKAAGIEKGSSEPKRKIVGKVTRKQIEEIAK
TKMPDLNANSLEAAMKIIEGTAKSMGIEVV
C:  GCUGGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAGU
GCGUAACAGCUCACCAGC
D:  GCUGGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAGU
GCGUAACAGCUCACCAGC
Description


Functional site

1) chain C
residue 1067
type
sequence A
description PUTATIVE THIOSTREPTON/MICROCOCCIN BINDING SITE
source : TSR

2) chain C
residue 1095
type
sequence A
description PUTATIVE THIOSTREPTON/MICROCOCCIN BINDING SITE
source : TSR

3) chain D
residue 1067
type
sequence A
description PUTATIVE THIOSTREPTON/MICROCOCCIN BINDING SITE
source : TSR

4) chain D
residue 1095
type
sequence A
description PUTATIVE THIOSTREPTON/MICROCOCCIN BINDING SITE
source : TSR

5) chain A
residue 22
type
sequence P
description PUTATIVE THIOSTREPTON/MICROCOCCIN BINDING SITE
source : TSR

6) chain A
residue 23
type
sequence P
description PUTATIVE THIOSTREPTON/MICROCOCCIN BINDING SITE
source : TSR

7) chain A
residue 26
type
sequence P
description PUTATIVE THIOSTREPTON/MICROCOCCIN BINDING SITE
source : TSR

8) chain C
residue 1071
type
sequence G
description BINDING SITE FOR RESIDUE CD C 201
source : AC1

9) chain C
residue 1086
type
sequence A
description BINDING SITE FOR RESIDUE CD C 202
source : AC2

10) chain C
residue 1087
type
sequence G
description BINDING SITE FOR RESIDUE CD C 202
source : AC2

11) chain C
residue 1073
type
sequence A
description BINDING SITE FOR RESIDUE MG C 210
source : AC3

12) chain C
residue 1093
type
sequence G
description BINDING SITE FOR RESIDUE MG C 210
source : AC3

13) chain C
residue 1094
type
sequence U
description BINDING SITE FOR RESIDUE MG C 210
source : AC3

14) chain C
residue 1097
type
sequence C
description BINDING SITE FOR RESIDUE MG C 210
source : AC3

15) chain C
residue 1067
type
sequence A
description BINDING SITE FOR RESIDUE CD C 211
source : AC4

16) chain D
residue 1095
type
sequence A
description BINDING SITE FOR RESIDUE CD C 211
source : AC4

17) chain A
residue 103
type
sequence K
description BINDING SITE FOR RESIDUE MG A 214
source : AC5

18) chain A
residue 106
type
sequence E
description BINDING SITE FOR RESIDUE MG A 214
source : AC5

19) chain B
residue 122
type
sequence E
description BINDING SITE FOR RESIDUE MG A 214
source : AC5

20) chain C
residue 1076
type
sequence C
description BINDING SITE FOR RESIDUE MG A 214
source : AC5

21) chain C
residue 1061
type
sequence U
description BINDING SITE FOR RESIDUE MG C 215
source : AC6

22) chain C
residue 1062
type
sequence G
description BINDING SITE FOR RESIDUE MG C 215
source : AC6

23) chain C
residue 1063
type
sequence G
description BINDING SITE FOR RESIDUE MG C 215
source : AC6

24) chain C
residue 1070
type
sequence A
description BINDING SITE FOR RESIDUE MG C 215
source : AC6

25) chain C
residue 1106
type
sequence A
description BINDING SITE FOR RESIDUE MG C 223
source : AC7

26) chain C
residue 1051
type
sequence G
description BINDING SITE FOR RESIDUE MG C 225
source : AC8

27) chain C
residue 1069
type
sequence A
description BINDING SITE FOR RESIDUE MG C 226
source : AC9

28) chain C
residue 1070
type
sequence A
description BINDING SITE FOR RESIDUE MG C 226
source : AC9

29) chain C
residue 1072
type
sequence C
description BINDING SITE FOR RESIDUE MG C 226
source : AC9

30) chain C
residue 1073
type
sequence A
description BINDING SITE FOR RESIDUE MG C 226
source : AC9

31) chain C
residue 1084
type
sequence A
description BINDING SITE FOR RESIDUE MG C 228
source : BC1

32) chain C
residue 1070
type
sequence A
description BINDING SITE FOR RESIDUE MG C 257
source : BC2

33) chain C
residue 1072
type
sequence C
description BINDING SITE FOR RESIDUE MG C 257
source : BC2

34) chain C
residue 1083
type
sequence U
description BINDING SITE FOR RESIDUE MG C 273
source : BC3

35) chain D
residue 1086
type
sequence A
description BINDING SITE FOR RESIDUE CD D 302
source : BC4

36) chain D
residue 1087
type
sequence G
description BINDING SITE FOR RESIDUE CD D 302
source : BC4

37) chain C
residue 1095
type
sequence A
description BINDING SITE FOR RESIDUE CD D 311
source : BC5

38) chain D
residue 1067
type
sequence A
description BINDING SITE FOR RESIDUE CD D 311
source : BC5

39) chain D
residue 1101
type
sequence U
description BINDING SITE FOR RESIDUE MG D 318
source : BC6

40) chain D
residue 1069
type
sequence A
description BINDING SITE FOR RESIDUE MG D 326
source : BC7

41) chain D
residue 1070
type
sequence A
description BINDING SITE FOR RESIDUE MG D 326
source : BC7

42) chain D
residue 1072
type
sequence C
description BINDING SITE FOR RESIDUE MG D 326
source : BC7

43) chain D
residue 1073
type
sequence A
description BINDING SITE FOR RESIDUE MG D 326
source : BC7

44) chain D
residue 1051
type
sequence G
description BINDING SITE FOR RESIDUE MG D 354
source : BC8

45) chain D
residue 1107
type
sequence G
description BINDING SITE FOR RESIDUE MG D 360
source : BC9

46) chain D
residue 1061
type
sequence U
description BINDING SITE FOR RESIDUE MG D 375
source : CC2

47) chain D
residue 1062
type
sequence G
description BINDING SITE FOR RESIDUE MG D 375
source : CC2

48) chain D
residue 1063
type
sequence G
description BINDING SITE FOR RESIDUE MG D 375
source : CC2

49) chain D
residue 1070
type
sequence A
description BINDING SITE FOR RESIDUE MG D 375
source : CC2

50) chain D
residue 1070
type
sequence A
description BINDING SITE FOR RESIDUE MG D 380
source : CC3

51) chain D
residue 1071
type
sequence G
description BINDING SITE FOR RESIDUE MG D 380
source : CC3

52) chain D
residue 1072
type
sequence C
description BINDING SITE FOR RESIDUE MG D 380
source : CC3

53) chain D
residue 1073
type
sequence A
description BINDING SITE FOR RESIDUE MG D 385
source : CC4

54) chain D
residue 1094
type
sequence U
description BINDING SITE FOR RESIDUE MG D 385
source : CC4

55) chain D
residue 1071
type
sequence G
description BINDING SITE FOR RESIDUE CD D 390
source : CC5

56) chain A
residue 113
type
sequence M
description BINDING SITE FOR RESIDUE CD A 413
source : CC7

57) chain A
residue 118
type
sequence A
description BINDING SITE FOR RESIDUE CD A 413
source : CC7

58) chain A
residue 72
type
sequence T
description BINDING SITE FOR RESIDUE CD A 414
source : CC8

59) chain A
residue 112
type
sequence K
description BINDING SITE FOR RESIDUE CD A 414
source : CC8

60) chain A
residue 115
type
sequence D
description BINDING SITE FOR RESIDUE CD A 414
source : CC8

61) chain C
residue 1059
type
sequence G
description BINDING SITE FOR RESIDUE CD A 414
source : CC8

62) chain C
residue 1060
type
sequence U
description BINDING SITE FOR RESIDUE CD A 414
source : CC8

63) chain C
residue 1054
type
sequence G
description BINDING SITE FOR RESIDUE MG C 437
source : CC9

64) chain C
residue 1077
type
sequence A
description BINDING SITE FOR RESIDUE MMC C 227
source : DC1

65) chain C
residue 1078
type
sequence U
description BINDING SITE FOR RESIDUE MMC C 227
source : DC1

66) chain C
residue 1089
type
sequence G
description BINDING SITE FOR RESIDUE MMC C 227
source : DC1

67) chain C
residue 1061
type
sequence U
description BINDING SITE FOR RESIDUE MMC C 230
source : DC2

68) chain C
residue 1069
type
sequence A
description BINDING SITE FOR RESIDUE MMC C 230
source : DC2

69) chain C
residue 1070
type
sequence A
description BINDING SITE FOR RESIDUE MMC C 230
source : DC2

70) chain D
residue 1061
type
sequence U
description BINDING SITE FOR RESIDUE MMC D 332
source : DC3

71) chain D
residue 1069
type
sequence A
description BINDING SITE FOR RESIDUE MMC D 332
source : DC3

72) chain D
residue 1070
type
sequence A
description BINDING SITE FOR RESIDUE MMC D 332
source : DC3

73) chain D
residue 1077
type
sequence A
description BINDING SITE FOR RESIDUE MMC D 347
source : DC4

74) chain D
residue 1078
type
sequence U
description BINDING SITE FOR RESIDUE MMC D 347
source : DC4

75) chain D
residue 1089
type
sequence G
description BINDING SITE FOR RESIDUE MMC D 347
source : DC4

76) chain A
residue 19
type
sequence T
description BINDING SITE FOR RESIDUE MMC A 415
source : DC5

77) chain A
residue 39
type
sequence C
description BINDING SITE FOR RESIDUE MMC A 415
source : DC5

78) chain A
residue 18
type
sequence A
description BINDING SITE FOR RESIDUE MMC A 416
source : DC6

79) chain A
residue 19
type
sequence T
description BINDING SITE FOR RESIDUE MMC A 416
source : DC6

80) chain A
residue 24
type
sequence V
description BINDING SITE FOR RESIDUE MMC A 416
source : DC6

81) chain A
residue 35
type
sequence I
description BINDING SITE FOR RESIDUE MMC A 416
source : DC6

82) chain A
residue 39
type
sequence C
description BINDING SITE FOR RESIDUE MMC A 416
source : DC6

83) chain A
residue 31
type
sequence H
description BINDING SITE FOR RESIDUE MMC A 448
source : DC7

84) chain C
residue 1097
type
sequence C
description BINDING SITE FOR RESIDUE MMC A 448
source : DC7

85) chain D
residue 1097
type
sequence C
description BINDING SITE FOR RESIDUE MMC D 451
source : DC8


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