eF-site ID 1m9y-F
PDB Code 1m9y
Chain F

click to enlarge
Title X-ray crystal structure of Cyclophilin A/HIV-1 CA N-terminal domain (1-146) M-type H87A,G89A Complex.
Classification Isomerase/Viral protein
Compound Cyclophilin A
Source Homo sapiens (Human) (Q72497_9HIV1)
Sequence F:  VNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALST
GEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGE
KFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEW
LDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADC
GQLE
Description


Functional site

1) chain F
residue 55
type catalytic
sequence R
description 189
source MCSA : MCSA4

2) chain F
residue 60
type catalytic
sequence F
description 189
source MCSA : MCSA4

3) chain F
residue 63
type catalytic
sequence Q
description 189
source MCSA : MCSA4

4) chain F
residue 102
type catalytic
sequence N
description 189
source MCSA : MCSA4

5) chain F
residue 113
type catalytic
sequence F
description 189
source MCSA : MCSA4

6) chain F
residue 122
type catalytic
sequence L
description 189
source MCSA : MCSA4

7) chain F
residue 126
type catalytic
sequence H
description 189
source MCSA : MCSA4

8) chain F
residue 28
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate
source Swiss-Prot : SWS_FT_FI10

9) chain F
residue 82
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0007744|PubMed:28112733
source Swiss-Prot : SWS_FT_FI11

10) chain F
residue 2
type MOD_RES
sequence V
description N-acetylvaline; partial; in Peptidyl-prolyl cis-trans isomerase A, N-terminally processed => ECO:0000269|PubMed:25489052, ECO:0000269|Ref.12, ECO:0007744|PubMed:19413330, ECO:0007744|PubMed:25944712
source Swiss-Prot : SWS_FT_FI2

11) chain F
residue 28
type MOD_RES
sequence K
description N6-acetyllysine; alternate => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI3

12) chain F
residue 82
type MOD_RES
sequence K
description N6-acetyllysine; alternate => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI3

13) chain F
residue 44
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI4

14) chain F
residue 76
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI4

15) chain F
residue 131
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI4

16) chain F
residue 77
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI5

17) chain F
residue 93
type MOD_RES
sequence T
description Phosphothreonine => ECO:0007744|PubMed:20068231
source Swiss-Prot : SWS_FT_FI6

18) chain F
residue 125
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000269|PubMed:20364129, ECO:0000269|PubMed:25678563, ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI7

19) chain F
residue 133
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000250|UniProtKB:P17742
source Swiss-Prot : SWS_FT_FI8

20) chain F
residue 108
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI9


Display surface

Download
Links