eF-site ID 1m8v-M
PDB Code 1m8v
Chain M

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Title Structure of Pyrococcus abyssii Sm Protein in Complex with a Uridine Heptamer
Classification RNA BINDING PROTEIN/RNA
Compound 5'-R(P*UP*UP*UP*UP*UP*UP*U)-3'
Source Pyrococcus abyssi (strain GE5 / Orsay) (1M8V)
Sequence M:  ERPLDVIHRSLDKDVLVILKKGFEFRGRLIGYDIHLNVVL
ADAEMIQDGEVVKRYGKIVIRGDNVLAISPT
Description


Functional site

1) chain M
residue 663
type
sequence R
description BINDING SITE FOR RESIDUE U L 421
source : CC1

2) chain M
residue 637
type
sequence H
description BINDING SITE FOR RESIDUE U M 422
source : CC2

3) chain M
residue 639
type
sequence N
description BINDING SITE FOR RESIDUE U M 422
source : CC2

4) chain M
residue 663
type
sequence R
description BINDING SITE FOR RESIDUE U M 422
source : CC2

5) chain M
residue 665
type
sequence D
description BINDING SITE FOR RESIDUE U M 422
source : CC2

6) chain M
residue 622
type
sequence K
description BINDING SITE FOR RESIDUE U M 423
source : CC3

7) chain M
residue 638
type
sequence L
description BINDING SITE FOR RESIDUE U M 423
source : CC3

8) chain M
residue 665
type
sequence D
description BINDING SITE FOR RESIDUE U M 423
source : CC3


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