eF-site ID 1m8v-K
PDB Code 1m8v
Chain K

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Title Structure of Pyrococcus abyssii Sm Protein in Complex with a Uridine Heptamer
Classification RNA BINDING PROTEIN/RNA
Compound 5'-R(P*UP*UP*UP*UP*UP*UP*U)-3'
Source Pyrococcus abyssi (strain GE5 / Orsay) (1M8V)
Sequence K:  ERPLDVIHRSLDKDVLVILKKGFEFRGRLIGYDIHLNVVL
ADAEMIQDGEVVKRYGKIVIRGDNVLAISPT
Description


Functional site

1) chain K
residue 463
type
sequence R
description BINDING SITE FOR RESIDUE U J 419
source : BC8

2) chain K
residue 437
type
sequence H
description BINDING SITE FOR RESIDUE U K 476
source : BC9

3) chain K
residue 439
type
sequence N
description BINDING SITE FOR RESIDUE U K 476
source : BC9

4) chain K
residue 463
type
sequence R
description BINDING SITE FOR RESIDUE U K 476
source : BC9

5) chain K
residue 464
type
sequence G
description BINDING SITE FOR RESIDUE U K 476
source : BC9

6) chain K
residue 465
type
sequence D
description BINDING SITE FOR RESIDUE U K 476
source : BC9

7) chain K
residue 437
type
sequence H
description BINDING SITE FOR RESIDUE U L 421
source : CC1

8) chain K
residue 438
type
sequence L
description BINDING SITE FOR RESIDUE U L 421
source : CC1


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