eF-site ID 1m8v-J
PDB Code 1m8v
Chain J

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Title Structure of Pyrococcus abyssii Sm Protein in Complex with a Uridine Heptamer
Classification RNA BINDING PROTEIN/RNA
Compound 5'-R(P*UP*UP*UP*UP*UP*UP*U)-3'
Source null (1M8V)
Sequence J:  ERPLDVIHRSLDKDVLVILKKGFEFRGRLIGYDIHLNVVL
ADAEMIQDGEVVKRYGKIVIRGDNVLAISPT
Description


Functional site

1) chain J
residue 363
type
sequence R
description BINDING SITE FOR RESIDUE U I 418
source : BC7

2) chain J
residue 339
type
sequence N
description BINDING SITE FOR RESIDUE U J 419
source : BC8

3) chain J
residue 363
type
sequence R
description BINDING SITE FOR RESIDUE U J 419
source : BC8

4) chain J
residue 364
type
sequence G
description BINDING SITE FOR RESIDUE U J 419
source : BC8

5) chain J
residue 365
type
sequence D
description BINDING SITE FOR RESIDUE U J 419
source : BC8

6) chain J
residue 338
type
sequence L
description BINDING SITE FOR RESIDUE U K 476
source : BC9


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