eF-site ID 1m8v-I
PDB Code 1m8v
Chain I

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Title Structure of Pyrococcus abyssii Sm Protein in Complex with a Uridine Heptamer
Classification RNA BINDING PROTEIN/RNA
Compound 5'-R(P*UP*UP*UP*UP*UP*UP*U)-3'
Source Pyrococcus abyssi (strain GE5 / Orsay) (1M8V)
Sequence I:  ERPLDVIHRSLDKDVLVILKKGFEFRGRLIGYDIHLNVVL
ADAEMIQDGEVVKRYGKIVIRGDNVLAISPT
Description


Functional site

1) chain I
residue 263
type
sequence R
description BINDING SITE FOR RESIDUE U H 417
source : BC6

2) chain I
residue 237
type
sequence H
description BINDING SITE FOR RESIDUE U I 418
source : BC7

3) chain I
residue 239
type
sequence N
description BINDING SITE FOR RESIDUE U I 418
source : BC7

4) chain I
residue 263
type
sequence R
description BINDING SITE FOR RESIDUE U I 418
source : BC7

5) chain I
residue 265
type
sequence D
description BINDING SITE FOR RESIDUE U I 418
source : BC7

6) chain I
residue 238
type
sequence L
description BINDING SITE FOR RESIDUE U J 419
source : BC8


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