|
|
eF-site ID
|
1m8v-H |
|
PDB Code
|
1m8v |
|
Chain
|
H |
|
click to enlarge
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Title
|
Structure of Pyrococcus abyssii Sm Protein in Complex with a Uridine Heptamer |
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Classification
|
RNA BINDING PROTEIN/RNA |
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Compound
|
5'-R(P*UP*UP*UP*UP*UP*UP*U)-3' |
|
Source
|
Pyrococcus abyssi (strain GE5 / Orsay) (1M8V) |
|
|
Sequence
|
H: |
ERPLDVIHRSLDKDVLVILKKGFEFRGRLIGYDIHLNVVL
ADAEMIQDGEVVKRYGKIVIRGDNVLAISPT
|
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Description
|
|
Functional site
|
|
|
1)
|
chain |
H |
| residue |
137 |
| type |
|
| sequence |
H
|
| description |
BINDING SITE FOR RESIDUE U H 417
|
| source |
: BC6
|
|
|
2)
|
chain |
H |
| residue |
139 |
| type |
|
| sequence |
N
|
| description |
BINDING SITE FOR RESIDUE U H 417
|
| source |
: BC6
|
|
|
3)
|
chain |
H |
| residue |
163 |
| type |
|
| sequence |
R
|
| description |
BINDING SITE FOR RESIDUE U H 417
|
| source |
: BC6
|
|
|
4)
|
chain |
H |
| residue |
165 |
| type |
|
| sequence |
D
|
| description |
BINDING SITE FOR RESIDUE U H 417
|
| source |
: BC6
|
|
|
5)
|
chain |
H |
| residue |
138 |
| type |
|
| sequence |
L
|
| description |
BINDING SITE FOR RESIDUE U I 418
|
| source |
: BC7
|
|
|
|