eF-site ID 1m1a-IJ
PDB Code 1m1a
Chain I, J
Title LIGAND BINDING ALTERS THE STRUCTURE AND DYNAMICS OF NUCLEOSOMAL DNA
Classification STRUCTURAL PROTEIN/DNA
Compound Palindromic 146 Base Pair DNA Fragment
Source Xenopus laevis (African clawed frog) (A0A8J0U496_XENLA)
Sequence I:  ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGG
AAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCT
GAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTT
GGTAGAATCTGCAGGTGGATATTGAT
J:  ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGG
AAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCT
GAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTT
GGTAGAATCTGCAGGTGGATATTGAT
Description


Functional site

1) chain J
residue 280
type
sequence G
description BINDING SITE FOR RESIDUE MN J 302
source : AC2

2) chain J
residue 281
type
sequence G
description BINDING SITE FOR RESIDUE MN J 302
source : AC2

3) chain I
residue 134
type
sequence G
description BINDING SITE FOR RESIDUE MN I 303
source : AC3

4) chain J
residue 216
type
sequence G
description BINDING SITE FOR RESIDUE MN J 304
source : AC4

5) chain I
residue 71
type
sequence G
description BINDING SITE FOR RESIDUE MN I 305
source : AC5

6) chain J
residue 267
type
sequence G
description BINDING SITE FOR RESIDUE MN J 306
source : AC6

7) chain J
residue 245
type
sequence A
description BINDING SITE FOR RESIDUE MN J 308
source : AC7

8) chain J
residue 246
type
sequence G
description BINDING SITE FOR RESIDUE MN J 308
source : AC7

9) chain I
residue 121
type
sequence G
description BINDING SITE FOR RESIDUE MN I 309
source : AC8

10) chain I
residue 39
type
sequence G
description BINDING SITE FOR RESIDUE MN I 310
source : AC9

11) chain I
residue 40
type
sequence G
description BINDING SITE FOR RESIDUE MN I 310
source : AC9

12) chain J
residue 283
type
sequence G
description BINDING SITE FOR RESIDUE IMT J 1901
source : BC1

13) chain J
residue 284
type
sequence G
description BINDING SITE FOR RESIDUE IMT J 1901
source : BC1

14) chain J
residue 285
type
sequence A
description BINDING SITE FOR RESIDUE IMT J 1901
source : BC1

15) chain J
residue 284
type
sequence G
description BINDING SITE FOR RESIDUE IMT J 1902
source : BC2

16) chain J
residue 285
type
sequence A
description BINDING SITE FOR RESIDUE IMT J 1902
source : BC2

17) chain J
residue 286
type
sequence T
description BINDING SITE FOR RESIDUE IMT J 1902
source : BC2

18) chain J
residue 285
type
sequence A
description BINDING SITE FOR RESIDUE PYB J 1903
source : BC3

19) chain J
residue 286
type
sequence T
description BINDING SITE FOR RESIDUE PYB J 1903
source : BC3

20) chain J
residue 286
type
sequence T
description BINDING SITE FOR RESIDUE PYB J 1904
source : BC4

21) chain J
residue 287
type
sequence A
description BINDING SITE FOR RESIDUE PYB J 1904
source : BC4

22) chain J
residue 288
type
sequence T
description BINDING SITE FOR RESIDUE PYB J 1904
source : BC4

23) chain I
residue 7
type
sequence A
description BINDING SITE FOR RESIDUE ABU J 1905
source : BC5

24) chain J
residue 287
type
sequence A
description BINDING SITE FOR RESIDUE ABU J 1905
source : BC5

25) chain J
residue 288
type
sequence T
description BINDING SITE FOR RESIDUE ABU J 1905
source : BC5

26) chain I
residue 7
type
sequence A
description BINDING SITE FOR RESIDUE PYB J 1906
source : BC6

27) chain I
residue 8
type
sequence T
description BINDING SITE FOR RESIDUE PYB J 1906
source : BC6

28) chain I
residue 9
type
sequence C
description BINDING SITE FOR RESIDUE PYB J 1906
source : BC6

29) chain I
residue 8
type
sequence T
description BINDING SITE FOR RESIDUE PYB J 1907
source : BC7

30) chain I
residue 9
type
sequence C
description BINDING SITE FOR RESIDUE PYB J 1907
source : BC7

31) chain I
residue 10
type
sequence C
description BINDING SITE FOR RESIDUE PYB J 1907
source : BC7

32) chain I
residue 9
type
sequence C
description BINDING SITE FOR RESIDUE PYB J 1908
source : BC8

33) chain I
residue 10
type
sequence C
description BINDING SITE FOR RESIDUE PYB J 1908
source : BC8

34) chain I
residue 11
type
sequence A
description BINDING SITE FOR RESIDUE PYB J 1908
source : BC8

35) chain J
residue 284
type
sequence G
description BINDING SITE FOR RESIDUE PYB J 1908
source : BC8

36) chain I
residue 10
type
sequence C
description BINDING SITE FOR RESIDUE PYB J 1909
source : BC9

37) chain I
residue 11
type
sequence A
description BINDING SITE FOR RESIDUE PYB J 1909
source : BC9

38) chain I
residue 12
type
sequence C
description BINDING SITE FOR RESIDUE PYB J 1909
source : BC9

39) chain J
residue 283
type
sequence G
description BINDING SITE FOR RESIDUE PYB J 1909
source : BC9

40) chain I
residue 11
type
sequence A
description BINDING SITE FOR RESIDUE BAL J 1910
source : CC1

41) chain J
residue 282
type
sequence T
description BINDING SITE FOR RESIDUE BAL J 1910
source : CC1

42) chain J
residue 283
type
sequence G
description BINDING SITE FOR RESIDUE BAL J 1910
source : CC1

43) chain J
residue 282
type
sequence T
description BINDING SITE FOR RESIDUE DIB J 1911
source : CC2


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