eF-site ID 1loj-M
PDB Code 1loj
Chain M

click to enlarge
Title Crystal structure of a Methanobacterial Sm-like archaeal protein (SmAP1) bound to uridine-5'-monophosphate (UMP)
Classification RNA BINDING PROTEIN, transcription
Compound small nuclear ribonucleoprotein homolog (Sm-like)
Source null (RUXX_METTH)
Sequence M:  VQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLV
LNDAEELEDGEVTRRLGTVLIRGDNIVYISRGK
Description


Functional site

1) chain M
residue 48
type
sequence N
description BINDING SITE FOR RESIDUE URI M 9004
source : AC4

2) chain M
residue 72
type
sequence R
description BINDING SITE FOR RESIDUE URI M 9004
source : AC4

3) chain M
residue 73
type
sequence G
description BINDING SITE FOR RESIDUE URI M 9004
source : AC4

4) chain M
residue 74
type
sequence D
description BINDING SITE FOR RESIDUE URI M 9004
source : AC4

5) chain M
residue 72
type
sequence R
description BINDING SITE FOR RESIDUE URI L 9005
source : AC5

6) chain M
residue 46
type
sequence H
description BINDING SITE FOR RESIDUE U N 9013
source : BC4

7) chain M
residue 47
type
sequence M
description BINDING SITE FOR RESIDUE U N 9013
source : BC4

8) chain M
residue 68
type
sequence T
description BINDING SITE FOR RESIDUE MPD L 7003
source : BC8

9) chain M
residue 69
type
sequence V
description BINDING SITE FOR RESIDUE MPD L 7003
source : BC8

10) chain M
residue 17
type
sequence A
description BINDING SITE FOR RESIDUE MPD M 7010
source : CC6

11) chain M
residue 18
type
sequence L
description BINDING SITE FOR RESIDUE MPD M 7010
source : CC6

12) chain M
residue 21
type
sequence S
description BINDING SITE FOR RESIDUE MPD M 7010
source : CC6

13) chain M
residue 79
type
sequence I
description BINDING SITE FOR RESIDUE MPD M 7010
source : CC6

14) chain M
residue 81
type
sequence R
description BINDING SITE FOR RESIDUE MPD M 7010
source : CC6


Display surface

Download
Links